XLOC_028814



Basic Information


Item Value
gene id XLOC_028814
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 26839078 ~ 26839608 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00058220
GAGGAGTTTAACAATGTATCAGCGACATAATGCAAAGAGCTGAATACATTATTAGGTAGTTCACATGTATCAACTTACCTCAAGAATCAGTGGATTTGTTTGGGAGAATTGTGGTCCAATTTTGGTCGGACATTCTATCATCATAACAGTGAAACCAACAATAAGGCAGAGAGGTTTTTCCTTACAGTGAAGTACCAATTTTTGAAGGGGAAGATGAATAGCAGTATTGATCGGCTTCTTTGCTTGCTTTGTGGTGATGTTCAGAAATATTACAGGTAAATTTTAAGATCACCATATTACTGTTGATATGCCAAATTGTAATTACCAGGTACAGAAATCATGTCTATGTTGTGGTACTCTGATTGTATGTAACATAAACCACCTCTGGCAATTACAAGTTACCTACAATT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00058220 True 410 lncRNA 0.36 2 26839078 26839608

Neighbor


gene id symbol gene type direction distance location
XLOC_028813 NA coding downstream 73268 26752348 ~ 26765810 (-)
XLOC_028812 NA coding downstream 416851 26417507 ~ 26422227 (-)
XLOC_028810 b4galnt3a coding downstream 425687 26390851 ~ 26413391 (-)
XLOC_028811 CU137645.1 coding downstream 431815 26407146 ~ 26407263 (-)
XLOC_028809 st8sia1 coding downstream 516242 26303613 ~ 26322836 (-)
XLOC_028815 creld2 coding upstream 242364 27081972 ~ 27099285 (-)
XLOC_028816 zbed4 coding upstream 272791 27112399 ~ 27129697 (-)
XLOC_028817 CR751234.1 coding upstream 301571 27141179 ~ 27141303 (-)
XLOC_028818 tafa5a coding upstream 412257 27251865 ~ 27398414 (-)
XLOC_028819 tbc1d22a coding upstream 787261 27626869 ~ 27897315 (-)
XLOC_028808 NA non-coding downstream 586957 26250874 ~ 26252121 (-)
XLOC_028807 BX957270.1 non-coding downstream 691528 26127177 ~ 26147550 (-)
XLOC_028824 CU694442.2 non-coding upstream 1592723 28432331 ~ 28432445 (-)
XLOC_028825 FO704886.1 non-coding upstream 1702413 28542021 ~ 28542135 (-)
XLOC_028826 NA non-coding upstream 1785261 28624869 ~ 28632583 (-)
XLOC_028827 NA non-coding upstream 1879621 28719229 ~ 28728040 (-)

Expression



Co-expression Network