Gene
RNA
| Item | Value |
|---|---|
| gene id | G988603 |
| gene name | cssa20h9orf84 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 49315838 ~ 49317190 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein C9orf84 homolog isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1125276 | True | 1173 | lncRNA | 0.54 | 2 | 49315838 | 49317190 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535815 | LOC106580049 | coding | downstream | 60227 | 49246900 ~ 49255611 (-) |
| LOC110535812 | LOC106580051 | coding | downstream | 369085 | 48846439 ~ 48946753 (-) |
| LOC118937449 | NA | coding | downstream | 470384 | 48832634 ~ 48845454 (-) |
| ela3l | LOC106580263 | coding | downstream | 634547 | 48676558 ~ 48681291 (-) |
| fam219ab | ci025 | coding | downstream | 651565 | 48651780 ~ 48664273 (-) |
| LOC100135853 | LOC106580045 | coding | upstream | 47660 | 49364850 ~ 49443064 (-) |
| LOC110535820 | LOC106580043 | coding | upstream | 59094 | 49376284 ~ 49384996 (-) |
| LOC110535824 | LOC106580039 | coding | upstream | 145502 | 49462692 ~ 49478969 (-) |
| emb | emb | coding | upstream | 177637 | 49494827 ~ 49508190 (-) |
| LOC110535829 | LOC106580032 | coding | upstream | 214431 | 49531621 ~ 49554496 (-) |
| G988591 | NA | non-coding | downstream | 9536 | 49305547 ~ 49306302 (-) |
| G988353 | NA | non-coding | downstream | 59248 | 49256338 ~ 49256590 (-) |
| G988350 | NA | non-coding | downstream | 69562 | 49246068 ~ 49246276 (-) |
| G988348 | NA | non-coding | downstream | 72811 | 49242730 ~ 49243027 (-) |
| G988347 | NA | non-coding | downstream | 73274 | 49242344 ~ 49242564 (-) |
| G988612 | NA | non-coding | upstream | 20319 | 49337509 ~ 49338150 (-) |
| G988652 | LOC100136247 | non-coding | upstream | 103955 | 49421145 ~ 49423391 (-) |
| G988672 | NA | non-coding | upstream | 132378 | 49449568 ~ 49450039 (-) |
| G988688 | NA | non-coding | upstream | 142185 | 49459375 ~ 49459716 (-) |
| G987496 | NA | other | downstream | 716428 | 48598493 ~ 48599410 (-) |
| G985835 | NA | other | downstream | 2255175 | 47059383 ~ 47060663 (-) |
| G985699 | LOC106613263 | other | downstream | 2514746 | 46793282 ~ 46801092 (-) |
| G985626 | NA | other | downstream | 2668889 | 46646328 ~ 46646949 (-) |
| gltpa | gltp | other | downstream | 2713672 | 46592176 ~ 46602166 (-) |
| G988700 | NA | other | upstream | 192038 | 49509228 ~ 49511433 (-) |
| LOC110535846 | LOC106580019 | other | upstream | 587539 | 49904325 ~ 49909935 (-) |
| G989341 | NA | other | upstream | 803386 | 50120576 ~ 50121816 (-) |
| G989343 | NA | other | upstream | 814139 | 50131329 ~ 50132173 (-) |
| G989880 | LOC106579995 | other | upstream | 1306240 | 50623430 ~ 50624105 (-) |
