G988690



Basic Information


Item Value
gene id G988690
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 49460933 ~ 49461185 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1125378
atttggggagtttctcccattcttctctgcagagcctctcaagctctgtcaggttggatgtggtgTGTCgttgcacaactattttcaggtctcttcagagatgttcgatcgggttcaagtctgggctctggctgggccactcaaggacattcagagacttgccccgaagccactcctgcgttgtcttgactgtgtgattaaggtcgttgtcatgttgggaggtgaaccttcacccccagtctgaggtcctgag

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1125378 True 253 lncRNA 0.52 1 49460933 49461185
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110535820 LOC106580043 coding downstream 75937 49376284 ~ 49384996 (-)
LOC100135853 LOC106580045 coding downstream 86757 49364850 ~ 49443064 (-)
LOC110535815 LOC106580049 coding downstream 205322 49246900 ~ 49255611 (-)
LOC110535812 LOC106580051 coding downstream 514180 48846439 ~ 48946753 (-)
LOC118937449 NA coding downstream 615479 48832634 ~ 48845454 (-)
LOC110535824 LOC106580039 coding upstream 1507 49462692 ~ 49478969 (-)
emb emb coding upstream 33642 49494827 ~ 49508190 (-)
LOC110535829 LOC106580032 coding upstream 70436 49531621 ~ 49554496 (-)
mboat4 mboat4 coding upstream 101160 49562345 ~ 49564429 (-)
LOC110535834 LOC106580030 coding upstream 149744 49610929 ~ 49620127 (-)
G988689 NA non-coding downstream 158 49460507 ~ 49460775 (-)
G988688 NA non-coding downstream 1217 49459375 ~ 49459716 (-)
G988672 NA non-coding downstream 10894 49449568 ~ 49450039 (-)
G988652 LOC100136247 non-coding downstream 37542 49421145 ~ 49423391 (-)
G988695 NA non-coding upstream 28536 49489721 ~ 49489990 (-)
G988696 NA non-coding upstream 28818 49490003 ~ 49490327 (-)
G988697 NA non-coding upstream 29265 49490450 ~ 49490729 (-)
G988708 NA non-coding upstream 53431 49514616 ~ 49515314 (-)
G988710 NA non-coding upstream 55505 49516690 ~ 49516900 (-)
G987496 NA other downstream 861523 48598493 ~ 48599410 (-)
G985835 NA other downstream 2400270 47059383 ~ 47060663 (-)
G985699 LOC106613263 other downstream 2659841 46793282 ~ 46801092 (-)
G985626 NA other downstream 2813984 46646328 ~ 46646949 (-)
gltpa gltp other downstream 2858767 46592176 ~ 46602166 (-)
G988700 NA other upstream 48043 49509228 ~ 49511433 (-)
LOC110535846 LOC106580019 other upstream 443544 49904325 ~ 49909935 (-)
G989341 NA other upstream 659391 50120576 ~ 50121816 (-)
G989343 NA other upstream 670144 50131329 ~ 50132173 (-)
G989880 LOC106579995 other upstream 1162245 50623430 ~ 50624105 (-)

Expression


G988690 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 15.
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G988690 Expression in each Bioproject

Bar chart with 18 bars.
G988690 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
End of interactive chart.

Co-expression Network