Gene
RNA
| Item | Value |
|---|---|
| gene id | G991043 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 51274311 ~ 51274956 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1128026 | True | 646 | lncRNA | 0.44 | 1 | 51274311 | 51274956 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535883 | LOC106579975 | coding | downstream | 28389 | 51224185 ~ 51245922 (-) |
| sh3glb2a | LOC106579977 | coding | downstream | 50189 | 51206885 ~ 51224122 (-) |
| LOC110535879 | LOC102784428 | coding | downstream | 117971 | 51150393 ~ 51156340 (-) |
| LOC110535875 | LOC106579981 | coding | downstream | 124729 | 51135634 ~ 51149582 (-) |
| LOC110535878 | LOC105014154 | coding | downstream | 138866 | 51129213 ~ 51135445 (-) |
| fam102aa | LOC106579973 | coding | upstream | 6707 | 51281663 ~ 51304505 (-) |
| LOC118937364 | LOC106585457 | coding | upstream | 89800 | 51364250 ~ 51370212 (-) |
| mmp11a | LOC106579968 | coding | upstream | 135713 | 51410669 ~ 51423793 (-) |
| LOC110535893 | NA | coding | upstream | 154524 | 51429480 ~ 51434945 (-) |
| upb1 | bup1 | coding | upstream | 185482 | 51460438 ~ 51471151 (-) |
| G991042 | NA | non-coding | downstream | 653 | 51273413 ~ 51273658 (-) |
| G991041 | NA | non-coding | downstream | 1388 | 51272658 ~ 51272923 (-) |
| G991039 | NA | non-coding | downstream | 3739 | 51270339 ~ 51270572 (-) |
| G991031 | NA | non-coding | downstream | 4690 | 51269305 ~ 51269621 (-) |
| G990503 | NA | non-coding | downstream | 75976 | 51198128 ~ 51198335 (-) |
| G991028 | NA | non-coding | upstream | 710 | 51275666 ~ 51279004 (-) |
| G991060 | NA | non-coding | upstream | 30561 | 51305517 ~ 51305983 (-) |
| G991065 | NA | non-coding | upstream | 36590 | 51311546 ~ 51311833 (-) |
| G991069 | NA | non-coding | upstream | 41806 | 51316762 ~ 51320232 (-) |
| G991025 | LOC106579971 | non-coding | upstream | 73552 | 51348508 ~ 51352137 (-) |
| G990411 | NA | other | downstream | 230003 | 51040780 ~ 51044308 (-) |
| G989880 | LOC106579995 | other | downstream | 650206 | 50623430 ~ 50624105 (-) |
| G989343 | NA | other | downstream | 1142138 | 50131329 ~ 50132173 (-) |
| G989341 | NA | other | downstream | 1152495 | 50120576 ~ 50121816 (-) |
| LOC110535846 | LOC106580019 | other | downstream | 1368059 | 49904325 ~ 49909935 (-) |
| specc1la | specc1l | other | upstream | 240590 | 51492045 ~ 51523279 (-) |
| G991349 | NA | other | upstream | 567110 | 51842066 ~ 51842522 (-) |
| ct030 | LOC106579885 | other | upstream | 3847554 | 55122507 ~ 55124484 (-) |
| adgra2 | LOC106579839 | other | upstream | 5415395 | 56690351 ~ 56787685 (-) |
