XLOC_028840


Basic Information

Item Value
gene id XLOC_028840
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 29821320 ~ 29821700 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00058234
ACTACCTGGAAGCTGTTATCATGCTGAAGCTAGTCCAGCAGCCTGGAATTGTGACACACATGACtgtaagtgtttgtttttccctACATTCTCTTCTTTGTTCTTATATGCTTCATCGATGTGCAAAACTGTCTGTTTGCAGGTTGAGGATTGGGAGGGGAGAAGCCGGATAGAGAATGGTGTCTGTGTTGCAGTGAAGGAGCACAAAGTACCGTTGTCACACGAACAGGAACTTGTAAGTTTATATTgtcttttatatcatttttaaatCATAACAGCAATAAATATATTGTGGCAAAGTCAtacttatttttttcctttctttaacTAGTGGTTCGACTTGTACTTCAATGAGGTGCGGCCAGTAATGCTGCAAGAAAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00058234 True 381 lncRNA 0.39 1 29821320 29821700

Neighbor

gene id symbol gene type direction distance location
XLOC_028839 si:ch211-231i17.3 coding downstream 181 29820388 ~ 29821139 (-)
XLOC_028838 znf1119 coding downstream 52016 29758289 ~ 29769304 (-)
XLOC_028837 si:dkey-191j3.1 coding downstream 67425 29753347 ~ 29753895 (-)
XLOC_028836 NA coding downstream 114101 29705193 ~ 29707219 (-)
XLOC_028835 BX248122.1 coding downstream 137415 29653496 ~ 29683905 (-)
XLOC_028841 si:ch211-231i17.4 coding upstream 6968 29828668 ~ 29833326 (-)
XLOC_028842 NA coding upstream 143578 29965278 ~ 29967134 (-)
XLOC_028843 si:rp71-7l19.2 coding upstream 223793 30045493 ~ 30057608 (-)
XLOC_028844 NA coding upstream 282485 30104185 ~ 30141117 (-)
XLOC_028845 si:ch211-22k7.9 coding upstream 324284 30145984 ~ 30174588 (-)
XLOC_028834 NA non-coding downstream 556866 29261963 ~ 29264454 (-)
XLOC_028833 NA non-coding downstream 673541 29146105 ~ 29147779 (-)
XLOC_028832 NA non-coding downstream 678594 29139745 ~ 29142726 (-)
XLOC_028829 BX088538.1 non-coding downstream 961505 28829894 ~ 28859815 (-)
XLOC_028848 NA non-coding upstream 494103 30315803 ~ 30319511 (-)
XLOC_028851 CR383668.2 non-coding upstream 542062 30363762 ~ 30364502 (-)
XLOC_028852 NA non-coding upstream 584154 30405854 ~ 30407827 (-)

Expression


Co-expression Network