Gene
RNA
| Item | Value |
|---|---|
| gene id | G992966 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 52902157 ~ 52902458 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1130150 | True | 302 | lncRNA | 0.41 | 1 | 52902157 | 52902458 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535944 | ccd92 | coding | downstream | 94385 | 52790915 ~ 52807772 (-) |
| LOC110535943 | LOC106579922 | coding | downstream | 112628 | 52711075 ~ 52789529 (-) |
| dgcr6 | dgcr6 | coding | downstream | 259099 | 52640176 ~ 52643058 (-) |
| LOC110535941 | LOC106579925 | coding | downstream | 265019 | 52629973 ~ 52637138 (-) |
| LOC110535938 | sf3a1 | coding | downstream | 281925 | 52605772 ~ 52620232 (-) |
| LOC110535946 | ncor2 | coding | upstream | 50763 | 52953221 ~ 53081845 (-) |
| LOC110535947 | LOC106579917 | coding | upstream | 240282 | 53142740 ~ 53174243 (-) |
| LOC118937476 | NA | coding | upstream | 252112 | 53154570 ~ 53154699 (-) |
| ulk1a | LOC106579916 | coding | upstream | 274245 | 53176703 ~ 53199398 (-) |
| LOC110535948 | adgrd1 | coding | upstream | 297281 | 53199739 ~ 53243947 (-) |
| G992255 | NA | non-coding | downstream | 5522 | 52896346 ~ 52896635 (-) |
| G992253 | NA | non-coding | downstream | 6250 | 52895701 ~ 52895907 (-) |
| G992249 | NA | non-coding | downstream | 8202 | 52893674 ~ 52893955 (-) |
| G992247 | NA | non-coding | downstream | 8800 | 52893061 ~ 52893357 (-) |
| G992184 | NA | non-coding | downstream | 49212 | 52852712 ~ 52852945 (-) |
| G992967 | NA | non-coding | upstream | 2705 | 52905163 ~ 52905487 (-) |
| G992980 | NA | non-coding | upstream | 19647 | 52922105 ~ 52922445 (-) |
| G993054 | NA | non-coding | upstream | 174420 | 53076878 ~ 53093417 (-) |
| G993183 | NA | non-coding | upstream | 456373 | 53358831 ~ 53361970 (-) |
| G991349 | NA | other | downstream | 1059635 | 51842066 ~ 51842522 (-) |
| specc1la | specc1l | other | downstream | 1378920 | 51492045 ~ 51523279 (-) |
| LOC118937364 | LOC106585457 | other | downstream | 1535740 | 51364250 ~ 51370212 (-) |
| G990411 | NA | other | downstream | 1857849 | 51040780 ~ 51044308 (-) |
| G989880 | LOC106579995 | other | downstream | 2278052 | 50623430 ~ 50624105 (-) |
| ct030 | LOC106579885 | other | upstream | 2220052 | 55122507 ~ 55124484 (-) |
| adgra2 | LOC106579839 | other | upstream | 3787893 | 56690351 ~ 56787685 (-) |
| G997269 | NA | other | upstream | 4036580 | 56939038 ~ 56941535 (-) |
| G997343 | NA | other | upstream | 4147517 | 57049975 ~ 57050306 (-) |
| LOC110536040 | LOC106579832 | other | upstream | 4187400 | 57088502 ~ 57096328 (-) |
