XLOC_028849 (znf1047)


Basic Information

Item Value
gene id XLOC_028849
gene name znf1047
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 30348676 ~ 30349370 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00055876
aaaaaagctaaacaaaaaagacttttattttggcgttgtatctgacgtcataaggctgcgccgctcctgcgctgtgattcaactggagaaaggataaagtgtccaaaggCTGAgagaaactcctgctgaagcgactgatctccacactgttataaagatggcgtttattaaagaggagagtgaagatgtgaagattgaagaaacattcacagtcaaaaaggaagatctgcaggaacaaacag

Function

symbol description
znf1047 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000101497

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00055876 True 242 mRNA 0.41 2 30348676 30349370

Neighbor

gene id symbol gene type direction distance location
XLOC_028848 NA coding downstream 29165 30315803 ~ 30319511 (-)
XLOC_028847 si:dkey-233e3.3 coding downstream 78928 30262399 ~ 30269748 (-)
XLOC_028846 si:dkey-265e15.2 coding downstream 98879 30209190 ~ 30249797 (-)
XLOC_028845 si:ch211-22k7.9 coding downstream 174088 30145984 ~ 30174588 (-)
XLOC_028844 NA coding downstream 207559 30104185 ~ 30141117 (-)
XLOC_028850 znf1083 coding upstream 4683 30354053 ~ 30362840 (-)
XLOC_028851 CR383668.2 coding upstream 14392 30363762 ~ 30364502 (-)
XLOC_028852 NA coding upstream 56484 30405854 ~ 30407827 (-)
XLOC_028853 znf1114 coding upstream 60380 30409750 ~ 30422325 (-)
XLOC_028854 si:dkey-199m13.5 coding upstream 79098 30428468 ~ 30440116 (-)
XLOC_028842 NA non-coding downstream 381542 29965278 ~ 29967134 (-)
XLOC_028840 NA non-coding downstream 526976 29821320 ~ 29821700 (-)
XLOC_028836 NA non-coding downstream 641457 29705193 ~ 29707219 (-)
XLOC_028856 NA non-coding upstream 191629 30540999 ~ 30546286 (-)
XLOC_028857 NA non-coding upstream 228106 30577476 ~ 30581395 (-)
XLOC_028861 AL953856.3 non-coding upstream 605971 30955341 ~ 30955504 (-)

Expression


Co-expression Network