XLOC_028853 (znf1114)


Basic Information

Item Value
gene id XLOC_028853
gene name znf1114
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 30409750 ~ 30422325 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00055879
aaaaaagctaaacaaaaaagacttttattttggcatgtcgtgtgacgtcataaggctgcgccgctcttgcgctaaattcagctggagaaaggataaagtgtcaaAACGCAGAgagaaactcctgctgaagcgactgatctccacactgttataaagatggcgtttattaaagaggagagtgaagatgtgaagattgaagaaacattcacagtcaaacaggaagatctgcaggaacaaacagacctgatTGAAGAGAATGAAAGGaataaagaggaggaacatcatgtcaaaattgaggaaaaaacttttttacagactgatggtattttgaaaaggagagacaagaattgtttcacctgcactcagtgtggaaagagttttggaagagaaggcaatcttaagattcacacgatgatccacactggagagaaaccatttacatgcactcagtgtgggaagagtttggcaaacaaaagccaacttaagattcacatgatgatccacactggaaataaatcattcacatgcactcagtgtgggaagatttttggaagaaaaggcaatcttaagattcacatgatgatccacactggagagaaaccatttacatgcactcagtgtggaaagagtttggcaaacaaaagcaaacttaagattcacatcatgatccacactggaaagaaaccattcacatgcactcagtgtgggaagagtttcacccactcatcataccttaataaacacatgaggatccacactagagagaaaccattcacatgcactcagtgtgggaagagtttcagccaatcatcatcccttaaactacacatgatgatccacactggagagaaaccattcacatgcactcagtgtgggaagagtttcagtcgCTCATCATCCCTTGattaccacatgaggatccacactggagagaaaccattcacatgcactcagtgtgggaagagtttcagccaatcatcatcccttaatcaccacacgaggatccacactggagagaaaccattcacatgcactcagtgtgggaagagtttcagccattcatcatcccttaatcaccacatgaggatgcACTGAT

Function

symbol description
znf1114 Predicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117163

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00055879 True 1096 mRNA 0.42 3 30409750 30422325

Neighbor

gene id symbol gene type direction distance location
XLOC_028852 NA coding downstream 1923 30405854 ~ 30407827 (-)
XLOC_028851 CR383668.2 coding downstream 45248 30363762 ~ 30364502 (-)
XLOC_028850 znf1083 coding downstream 46910 30354053 ~ 30362840 (-)
XLOC_028849 znf1047 coding downstream 60380 30348676 ~ 30349370 (-)
XLOC_028848 NA coding downstream 90239 30315803 ~ 30319511 (-)
XLOC_028854 si:dkey-199m13.5 coding upstream 6143 30428468 ~ 30440116 (-)
XLOC_028855 znf1052 coding upstream 99325 30521650 ~ 30528239 (-)
XLOC_028856 NA coding upstream 118674 30540999 ~ 30546286 (-)
XLOC_028857 NA coding upstream 155151 30577476 ~ 30581395 (-)
XLOC_028858 si:dkey-16p19.5 coding upstream 284957 30707282 ~ 30712588 (-)
XLOC_028844 NA non-coding downstream 268633 30104185 ~ 30141117 (-)
XLOC_028842 NA non-coding downstream 442616 29965278 ~ 29967134 (-)
XLOC_028861 AL953856.3 non-coding upstream 533016 30955341 ~ 30955504 (-)
XLOC_028862 AL953856.9 non-coding upstream 552591 30974916 ~ 30975079 (-)
XLOC_028863 AL953856.10 non-coding upstream 563031 30985356 ~ 30985519 (-)

Expression


Co-expression Network