G993738


Basic Information

Item Value
gene id G993738
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 54226131 ~ 54226463 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1130983
gccatttcttaaagatatccataaaaagtgttgtttaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaaaacgttatgtttggcataaaagcaacacagctgaacacaccatccccactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatagagccaaatacaggaccattctggaagagaacctgatggagtctgcaaaagacctgag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1130983 True 333 TUCP 0.44 1 54226131 54226463

Neighbor

gene id symbol gene type direction distance location
LOC110535962 LOC106579901 coding upstream 79427 54113791 ~ 54146704 (+)
LOC110535959 LOC106579903 coding upstream 143043 54069351 ~ 54083088 (+)
LOC110535960 LOC106579905 coding upstream 157286 54067599 ~ 54068845 (+)
slc15a4 slc15a4 coding upstream 478712 53702905 ~ 53747419 (+)
LOC118937368 NA coding upstream 545231 53680460 ~ 53682111 (+)
LOC110535965 LOC106579898 coding downstream 101543 54328006 ~ 54349588 (+)
LOC118937454 NA coding downstream 312525 54538988 ~ 54549711 (+)
LOC110536632 NA coding downstream 403241 54629704 ~ 54631495 (+)
LOC110535974 vgll4 coding downstream 775932 55002395 ~ 55015938 (+)
slc20a1a s20aa coding downstream 809919 55036382 ~ 55043511 (+)
G993737 NA non-coding upstream 5562 54220074 ~ 54220569 (+)
G993639 NA non-coding upstream 163544 54062358 ~ 54062587 (+)
G993637 NA non-coding upstream 165911 54059922 ~ 54060220 (+)
G993634 NA non-coding upstream 170809 54054997 ~ 54055322 (+)
G993615 NA non-coding upstream 195561 54030276 ~ 54030570 (+)
G993739 NA non-coding downstream 1020 54227483 ~ 54228150 (+)
G993700 NA non-coding downstream 4082 54230545 ~ 54231413 (+)
G993706 NA non-coding downstream 5126 54231589 ~ 54231865 (+)
G993707 NA non-coding downstream 6578 54233041 ~ 54233386 (+)
G993741 NA non-coding downstream 9018 54235481 ~ 54235995 (+)
G993612 NA other upstream 200077 54025768 ~ 54026054 (+)
G992601 fzd10 other upstream 776489 53446507 ~ 53449642 (+)
LOC110535061 rimbp2 other upstream 843940 53281076 ~ 53398401 (+)
G991714 LOC106579928 other upstream 1681571 52542244 ~ 52544560 (+)
G990964 NA other upstream 2034394 52187134 ~ 52191737 (+)
G995268 NA other downstream 1128738 55355201 ~ 55357116 (+)
LOC110535064 cabin1 other downstream 1263634 55489662 ~ 55577699 (+)
G995364 NA other downstream 1292246 55518709 ~ 55519174 (+)
G995607 NA other downstream 1776391 56002854 ~ 56004867 (+)

Expression


Co-expression Network