G993750


Basic Information

Item Value
gene id G993750
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 54245897 ~ 54246117 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1130995
gcctgcagtgttctgtcatactatccaggtctgtgcccaaacaattcgagcttctacttttaaaaatccacttttccagaaacaagtctctcactgttgccgcttgttatagacctccTTAAGCCCCCAGGTGTGCCCTGAACAattgatttgaattgaattgaattgattgcCCACCATCTCTCTTCAGAGTTCATACTGTTAGGTGatctaaactggga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1130995 True 221 lncRNA 0.43 1 54245897 54246117

Neighbor

gene id symbol gene type direction distance location
LOC110535063 LOC106579900 coding upstream 15453 54147143 ~ 54230444 (+)
LOC110535962 LOC106579901 coding upstream 99193 54113791 ~ 54146704 (+)
LOC110535959 LOC106579903 coding upstream 162809 54069351 ~ 54083088 (+)
LOC110535960 LOC106579905 coding upstream 177052 54067599 ~ 54068845 (+)
slc15a4 slc15a4 coding upstream 498478 53702905 ~ 53747419 (+)
LOC110535965 LOC106579898 coding downstream 81889 54328006 ~ 54349588 (+)
LOC118937454 NA coding downstream 292871 54538988 ~ 54549711 (+)
LOC110536632 NA coding downstream 383587 54629704 ~ 54631495 (+)
LOC110535974 vgll4 coding downstream 756278 55002395 ~ 55015938 (+)
slc20a1a s20aa coding downstream 790265 55036382 ~ 55043511 (+)
G993743 NA non-coding upstream 8732 54236953 ~ 54237165 (+)
G993742 NA non-coding upstream 9464 54236212 ~ 54236433 (+)
G993741 NA non-coding upstream 9902 54235481 ~ 54235995 (+)
G993707 NA non-coding upstream 12511 54233041 ~ 54233386 (+)
G993706 NA non-coding upstream 14032 54231589 ~ 54231865 (+)
G993840 NA non-coding downstream 138026 54384143 ~ 54387724 (+)
G993853 NA non-coding downstream 160560 54406677 ~ 54406890 (+)
G993857 NA non-coding downstream 167335 54413452 ~ 54413655 (+)
G994344 NA non-coding downstream 359855 54605972 ~ 54606298 (+)
G994351 NA non-coding downstream 365825 54611942 ~ 54612149 (+)
G993738 NA other upstream 19434 54226131 ~ 54226463 (+)
G993612 NA other upstream 219843 54025768 ~ 54026054 (+)
G992601 fzd10 other upstream 796255 53446507 ~ 53449642 (+)
LOC110535061 rimbp2 other upstream 863706 53281076 ~ 53398401 (+)
G991714 LOC106579928 other upstream 1701337 52542244 ~ 52544560 (+)
G995268 NA other downstream 1109084 55355201 ~ 55357116 (+)
LOC110535064 cabin1 other downstream 1243980 55489662 ~ 55577699 (+)
G995364 NA other downstream 1272592 55518709 ~ 55519174 (+)
G995607 NA other downstream 1756737 56002854 ~ 56004867 (+)

Expression


Co-expression Network