G994618


Basic Information

Item Value
gene id G994618
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 54795170 ~ 54795695 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1131899
gttataatctccacccggcactgccagaagaggactggccacccctcatagcctggttcctctctaggtttcttcctaggtttgggcctttctagggagtttttcctagccaccgtgcttcttcacctgcattgcttgctgtttggggttttaggctgggtttctgtacagcactttgagatatcagctgatgtaagaagggctatataaatcaatttgatttgatttgatttgaatggcaATCGGCACAGTGAACCTTTTGCCCAATTGTTTCAACACAGCCTGATCTCATGATttaatgttttacatttttgggGTAAACATTTGCCATAATGctaaccctgactctaaccctgaccttacTCCTTACCCTTGCCTTAACCTTAACCTACTGTCATCCTACAACTAACCCTCATCAATACAATATGTACAATTAACAATACTGGAAATCCCAACACTATGGTTTGAAAGTCTTGTCCCTAATCCCAAAGTTCCTCCAAAGTACCTGTCAAAAGAGAGTCGGAAT

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1131899 True 526 lncRNA 0.43 1 54795170 54795695

Neighbor

gene id symbol gene type direction distance location
LOC110536632 NA coding upstream 163675 54629704 ~ 54631495 (+)
LOC118937454 NA coding upstream 245459 54538988 ~ 54549711 (+)
LOC110535965 LOC106579898 coding upstream 445582 54328006 ~ 54349588 (+)
LOC110535063 LOC106579900 coding upstream 564726 54147143 ~ 54230444 (+)
LOC110535962 LOC106579901 coding upstream 648466 54113791 ~ 54146704 (+)
LOC110535974 vgll4 coding downstream 206700 55002395 ~ 55015938 (+)
slc20a1a s20aa coding downstream 240687 55036382 ~ 55043511 (+)
LOC110535976 LOC106579886 coding downstream 248828 55044523 ~ 55070046 (+)
LOC110535979 LOC106579884 coding downstream 277179 55072874 ~ 55075806 (+)
adra1a adra1a coding downstream 343298 55136414 ~ 55157272 (+)
G994556 LOC106579892 non-coding upstream 6652 54786508 ~ 54788518 (+)
G994381 NA non-coding upstream 167041 54627912 ~ 54628129 (+)
G994376 NA non-coding upstream 169970 54624986 ~ 54625200 (+)
G994374 NA non-coding upstream 170686 54624279 ~ 54624484 (+)
G994370 NA non-coding upstream 172112 54622788 ~ 54623058 (+)
G994707 NA non-coding downstream 110345 54906040 ~ 54906295 (+)
G994710 LOC106579890 non-coding downstream 118177 54913872 ~ 54914899 (+)
G994747 LOC106579889 non-coding downstream 151796 54947491 ~ 54952437 (+)
G994756 NA non-coding downstream 164476 54960171 ~ 54960406 (+)
G994763 NA non-coding downstream 174296 54969991 ~ 54970202 (+)
G993738 NA other upstream 568707 54226131 ~ 54226463 (+)
G993612 NA other upstream 769116 54025768 ~ 54026054 (+)
G992601 fzd10 other upstream 1345528 53446507 ~ 53449642 (+)
LOC110535061 rimbp2 other upstream 1412979 53281076 ~ 53398401 (+)
G991714 LOC106579928 other upstream 2250610 52542244 ~ 52544560 (+)
G995268 NA other downstream 559506 55355201 ~ 55357116 (+)
LOC110535064 cabin1 other downstream 694402 55489662 ~ 55577699 (+)
G995364 NA other downstream 723014 55518709 ~ 55519174 (+)
G995607 NA other downstream 1207159 56002854 ~ 56004867 (+)

Expression


Co-expression Network