XLOC_028861 (AL953856.3)


Basic Information

Item Value
gene id XLOC_028861
gene name AL953856.3
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 30955341 ~ 30955504 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00055888
atacttacctggcaggggagataccatgatcaagaaggtggttcacccagggcgaggcttggccattgcactccggccacgctgacccctgcgaattccccaaatgtgggaatctcgactgcataatttctggtagtgggggactgcgttcgcgctctcccctt

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000109664

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00055888 True 164 snRNA 0.57 1 30955341 30955504

Neighbor

gene id symbol gene type direction distance location
XLOC_028860 znf1099 coding downstream 24045 30925543 ~ 30931296 (-)
XLOC_028858 si:dkey-16p19.5 coding downstream 242753 30707282 ~ 30712588 (-)
XLOC_028857 NA coding downstream 373946 30577476 ~ 30581395 (-)
XLOC_028856 NA coding downstream 409055 30540999 ~ 30546286 (-)
XLOC_028855 znf1052 coding downstream 427102 30521650 ~ 30528239 (-)
XLOC_028862 AL953856.9 coding upstream 19412 30974916 ~ 30975079 (-)
XLOC_028863 AL953856.10 coding upstream 29852 30985356 ~ 30985519 (-)
XLOC_028864 AL953856.7 coding upstream 36377 30991881 ~ 30992044 (-)
XLOC_028865 AL953856.8 coding upstream 37682 30993186 ~ 30993349 (-)
XLOC_028866 AL953856.6 coding upstream 40292 30995796 ~ 30995959 (-)
XLOC_028852 NA non-coding downstream 547514 30405854 ~ 30407827 (-)
XLOC_028851 CR383668.2 non-coding downstream 590839 30363762 ~ 30364502 (-)
XLOC_028848 NA non-coding downstream 635830 30315803 ~ 30319511 (-)

Expression


Co-expression Network