G994807



Basic Information


Item Value
gene id G994807
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 55090825 ~ 55091056 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1132107
CCCTGCAACCATACCAGGCACAGTGTCTGAGTAATGCACTACCAACAGCGTACACAGCCATGCTTTTGGCTAACAATGGGAAATACCTACGCAATACATTTATAAACATAACGACAAGTGTCATGACCATTGATTATTATCAAGCACAATTGATATACCTGCTACATAATGTTTAGGACTGTTTAGTCTAGGCTTTATGAACCTAAACAGTGTTTCTATCATGCAGTTGATC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1132107 True 232 lncRNA 0.39 1 55090825 55091056

Neighbor


gene id symbol gene type direction distance location
LOC110535979 LOC106579884 coding upstream 15019 55072874 ~ 55075806 (+)
LOC110535976 LOC106579886 coding upstream 20779 55044523 ~ 55070046 (+)
slc20a1a s20aa coding upstream 47314 55036382 ~ 55043511 (+)
LOC110535974 vgll4 coding upstream 74887 55002395 ~ 55015938 (+)
LOC110536632 NA coding upstream 459330 54629704 ~ 54631495 (+)
adra1a adra1a coding downstream 47937 55136414 ~ 55157272 (+)
ddx51 ddx51 coding downstream 286627 55377683 ~ 55382284 (+)
LOC110535988 LOC106579875 coding downstream 292370 55383426 ~ 55387596 (+)
LOC110535989 LOC106579874 coding downstream 321319 55412375 ~ 55422164 (+)
LOC118937389 NA coding downstream 390142 55481198 ~ 55488780 (+)
G994803 NA non-coding upstream 10094 55080280 ~ 55080731 (+)
G994741 NA non-coding upstream 18850 55067018 ~ 55071975 (+)
G994738 NA non-coding upstream 35454 55054445 ~ 55055371 (+)
G994782 NA non-coding upstream 84741 55000945 ~ 55006084 (+)
G994779 NA non-coding upstream 93179 54997236 ~ 54997646 (+)
G994808 LOC106579883 non-coding downstream 292 55091348 ~ 55091580 (+)
G994852 LOC106579880 non-coding downstream 80417 55171473 ~ 55175694 (+)
G994867 LOC106579879 non-coding downstream 105576 55196632 ~ 55199999 (+)
G994868 NA non-coding downstream 106934 55197990 ~ 55198738 (+)
G993738 NA other upstream 864362 54226131 ~ 54226463 (+)
G993612 NA other upstream 1064771 54025768 ~ 54026054 (+)
G992601 fzd10 other upstream 1641183 53446507 ~ 53449642 (+)
LOC110535061 rimbp2 other upstream 1708634 53281076 ~ 53398401 (+)
G995268 NA other downstream 264145 55355201 ~ 55357116 (+)
LOC110535064 cabin1 other downstream 399041 55489662 ~ 55577699 (+)
G995364 NA other downstream 427653 55518709 ~ 55519174 (+)
G995607 NA other downstream 911798 56002854 ~ 56004867 (+)
LOC110536010 LOC106579856 other downstream 937115 56028141 ~ 56037300 (+)

Expression



Co-expression Network