Item | Value |
---|---|
gene id | G994807 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048575.1 |
NCBI id | CM023229.2 |
chromosome length | 86280908 |
location | 55090825 ~ 55091056 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU1132107 | True | 232 | lncRNA | 0.39 | 1 | 55090825 | 55091056 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110535979 | LOC106579884 | coding | upstream | 15019 | 55072874 ~ 55075806 (+) |
LOC110535976 | LOC106579886 | coding | upstream | 20779 | 55044523 ~ 55070046 (+) |
slc20a1a | s20aa | coding | upstream | 47314 | 55036382 ~ 55043511 (+) |
LOC110535974 | vgll4 | coding | upstream | 74887 | 55002395 ~ 55015938 (+) |
LOC110536632 | NA | coding | upstream | 459330 | 54629704 ~ 54631495 (+) |
adra1a | adra1a | coding | downstream | 47937 | 55136414 ~ 55157272 (+) |
ddx51 | ddx51 | coding | downstream | 286627 | 55377683 ~ 55382284 (+) |
LOC110535988 | LOC106579875 | coding | downstream | 292370 | 55383426 ~ 55387596 (+) |
LOC110535989 | LOC106579874 | coding | downstream | 321319 | 55412375 ~ 55422164 (+) |
LOC118937389 | NA | coding | downstream | 390142 | 55481198 ~ 55488780 (+) |
G994803 | NA | non-coding | upstream | 10094 | 55080280 ~ 55080731 (+) |
G994741 | NA | non-coding | upstream | 18850 | 55067018 ~ 55071975 (+) |
G994738 | NA | non-coding | upstream | 35454 | 55054445 ~ 55055371 (+) |
G994782 | NA | non-coding | upstream | 84741 | 55000945 ~ 55006084 (+) |
G994779 | NA | non-coding | upstream | 93179 | 54997236 ~ 54997646 (+) |
G994808 | LOC106579883 | non-coding | downstream | 292 | 55091348 ~ 55091580 (+) |
G994852 | LOC106579880 | non-coding | downstream | 80417 | 55171473 ~ 55175694 (+) |
G994867 | LOC106579879 | non-coding | downstream | 105576 | 55196632 ~ 55199999 (+) |
G994868 | NA | non-coding | downstream | 106934 | 55197990 ~ 55198738 (+) |
G993738 | NA | other | upstream | 864362 | 54226131 ~ 54226463 (+) |
G993612 | NA | other | upstream | 1064771 | 54025768 ~ 54026054 (+) |
G992601 | fzd10 | other | upstream | 1641183 | 53446507 ~ 53449642 (+) |
LOC110535061 | rimbp2 | other | upstream | 1708634 | 53281076 ~ 53398401 (+) |
G995268 | NA | other | downstream | 264145 | 55355201 ~ 55357116 (+) |
LOC110535064 | cabin1 | other | downstream | 399041 | 55489662 ~ 55577699 (+) |
G995364 | NA | other | downstream | 427653 | 55518709 ~ 55519174 (+) |
G995607 | NA | other | downstream | 911798 | 56002854 ~ 56004867 (+) |
LOC110536010 | LOC106579856 | other | downstream | 937115 | 56028141 ~ 56037300 (+) |