Gene
RNA
| Item | Value |
|---|---|
| gene id | G995197 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 55300349 ~ 55301533 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1132517 | True | 425 | lncRNA | 0.39 | 2 | 55300349 | 55301533 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| adra1a | adra1a | coding | upstream | 143800 | 55136414 ~ 55157272 (+) |
| LOC110535979 | LOC106579884 | coding | upstream | 224543 | 55072874 ~ 55075806 (+) |
| LOC110535976 | LOC106579886 | coding | upstream | 230303 | 55044523 ~ 55070046 (+) |
| slc20a1a | s20aa | coding | upstream | 256838 | 55036382 ~ 55043511 (+) |
| LOC110535974 | vgll4 | coding | upstream | 284411 | 55002395 ~ 55015938 (+) |
| ddx51 | ddx51 | coding | downstream | 76150 | 55377683 ~ 55382284 (+) |
| LOC110535988 | LOC106579875 | coding | downstream | 81893 | 55383426 ~ 55387596 (+) |
| LOC110535989 | LOC106579874 | coding | downstream | 110842 | 55412375 ~ 55422164 (+) |
| LOC118937389 | NA | coding | downstream | 179665 | 55481198 ~ 55488780 (+) |
| LOC110535064 | cabin1 | coding | downstream | 188129 | 55489662 ~ 55577699 (+) |
| G995196 | NA | non-coding | upstream | 404 | 55299697 ~ 55299945 (+) |
| G995195 | NA | non-coding | upstream | 677 | 55299442 ~ 55299672 (+) |
| G995191 | NA | non-coding | upstream | 4747 | 55295244 ~ 55295602 (+) |
| G994933 | NA | non-coding | upstream | 15726 | 55284344 ~ 55284623 (+) |
| G994931 | NA | non-coding | upstream | 18866 | 55281232 ~ 55281483 (+) |
| G995198 | NA | non-coding | downstream | 499 | 55302032 ~ 55302258 (+) |
| G995258 | NA | non-coding | downstream | 44943 | 55346476 ~ 55346865 (+) |
| G995264 | NA | non-coding | downstream | 48234 | 55349767 ~ 55349995 (+) |
| G995269 | NA | non-coding | downstream | 58320 | 55359853 ~ 55365400 (+) |
| G995273 | NA | non-coding | downstream | 62787 | 55364320 ~ 55366154 (+) |
| G993738 | NA | other | upstream | 1073886 | 54226131 ~ 54226463 (+) |
| G993612 | NA | other | upstream | 1274295 | 54025768 ~ 54026054 (+) |
| G992601 | fzd10 | other | upstream | 1850707 | 53446507 ~ 53449642 (+) |
| LOC110535061 | rimbp2 | other | upstream | 1918158 | 53281076 ~ 53398401 (+) |
| G995268 | NA | other | downstream | 53668 | 55355201 ~ 55357116 (+) |
| G995364 | NA | other | downstream | 217176 | 55518709 ~ 55519174 (+) |
| G995607 | NA | other | downstream | 701321 | 56002854 ~ 56004867 (+) |
| LOC110536010 | LOC106579856 | other | downstream | 726638 | 56028141 ~ 56037300 (+) |
