Gene
RNA
| Item | Value |
|---|---|
| gene id | G995402 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 55597394 ~ 55599032 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: kelch-like protein 22 |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1132770 | False | 757 | lncRNA | 0.54 | 3 | 55597394 | 55598352 |
| TU1132772 | True | 348 | lncRNA | 0.52 | 2 | 55598071 | 55599032 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tbx16 | LOC106579871 | coding | upstream | 6723 | 55587364 ~ 55590671 (+) |
| LOC110535064 | cabin1 | coding | upstream | 19695 | 55489662 ~ 55577699 (+) |
| LOC118937389 | NA | coding | upstream | 108614 | 55481198 ~ 55488780 (+) |
| LOC110535989 | LOC106579874 | coding | upstream | 175230 | 55412375 ~ 55422164 (+) |
| LOC110535988 | LOC106579875 | coding | upstream | 209798 | 55383426 ~ 55387596 (+) |
| LOC110535995 | LOC106580250 | coding | downstream | 31446 | 55630478 ~ 55650138 (+) |
| LOC110535996 | LOC106585571 | coding | downstream | 77104 | 55676136 ~ 55680687 (+) |
| LOC110535997 | LOC106579866 | coding | downstream | 84811 | 55683843 ~ 55690131 (+) |
| LOC110535066 | gnrh1 | coding | downstream | 91720 | 55690752 ~ 55691740 (+) |
| ankrd39 | ankrd39 | coding | downstream | 92758 | 55691790 ~ 55706758 (+) |
| G995377 | NA | non-coding | upstream | 28138 | 55531500 ~ 55569256 (+) |
| G995368 | NA | non-coding | upstream | 99050 | 55495786 ~ 55498344 (+) |
| G995314 | nefl | non-coding | upstream | 126299 | 55469985 ~ 55471095 (+) |
| G995327 | dock5 | non-coding | upstream | 161194 | 55433993 ~ 55436200 (+) |
| G995436 | NA | non-coding | downstream | 37143 | 55636175 ~ 55636374 (+) |
| G995430 | NA | non-coding | downstream | 52928 | 55651960 ~ 55652972 (+) |
| G995462 | NA | non-coding | downstream | 109350 | 55708382 ~ 55709298 (+) |
| G995500 | NA | non-coding | downstream | 178507 | 55777539 ~ 55844504 (+) |
| G995466 | NA | non-coding | downstream | 206256 | 55805288 ~ 55806077 (+) |
| G995364 | NA | other | upstream | 78220 | 55518709 ~ 55519174 (+) |
| G995268 | NA | other | upstream | 240278 | 55355201 ~ 55357116 (+) |
| slc20a1a | s20aa | other | upstream | 553985 | 55036382 ~ 55043511 (+) |
| G993738 | NA | other | upstream | 1370931 | 54226131 ~ 54226463 (+) |
| G995607 | NA | other | downstream | 403822 | 56002854 ~ 56004867 (+) |
| LOC110536010 | LOC106579856 | other | downstream | 429139 | 56028141 ~ 56037300 (+) |
| LOC110536021 | LOC106579845 | other | downstream | 787487 | 56386314 ~ 56434657 (+) |
| LOC110536038 | LOC106579834 | other | downstream | 1453077 | 57044708 ~ 57072429 (+) |
| G997824 | NA | other | downstream | 2188436 | 57787468 ~ 57789171 (+) |
