Gene
RNA
| Item | Value |
|---|---|
| gene id | G995430 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 55651960 ~ 55652972 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1132824 | True | 1013 | lncRNA | 0.36 | 1 | 55651960 | 55652972 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535995 | LOC106580250 | coding | upstream | 1822 | 55630478 ~ 55650138 (+) |
| tbx16 | LOC106579871 | coding | upstream | 61289 | 55587364 ~ 55590671 (+) |
| LOC110535064 | cabin1 | coding | upstream | 74261 | 55489662 ~ 55577699 (+) |
| LOC118937389 | NA | coding | upstream | 163180 | 55481198 ~ 55488780 (+) |
| LOC110535989 | LOC106579874 | coding | upstream | 229796 | 55412375 ~ 55422164 (+) |
| LOC110535996 | LOC106585571 | coding | downstream | 23164 | 55676136 ~ 55680687 (+) |
| LOC110535997 | LOC106579866 | coding | downstream | 30871 | 55683843 ~ 55690131 (+) |
| LOC110535066 | gnrh1 | coding | downstream | 37780 | 55690752 ~ 55691740 (+) |
| ankrd39 | ankrd39 | coding | downstream | 38818 | 55691790 ~ 55706758 (+) |
| fgfr1a | LOC106579865 | coding | downstream | 69780 | 55722752 ~ 55763695 (+) |
| G995436 | NA | non-coding | upstream | 15586 | 55636175 ~ 55636374 (+) |
| G995402 | NA | non-coding | upstream | 52928 | 55597394 ~ 55599032 (+) |
| G995377 | NA | non-coding | upstream | 82704 | 55531500 ~ 55569256 (+) |
| G995368 | NA | non-coding | upstream | 153616 | 55495786 ~ 55498344 (+) |
| G995462 | NA | non-coding | downstream | 55410 | 55708382 ~ 55709298 (+) |
| G995500 | NA | non-coding | downstream | 124567 | 55777539 ~ 55844504 (+) |
| G995466 | NA | non-coding | downstream | 152316 | 55805288 ~ 55806077 (+) |
| G995531 | NA | non-coding | downstream | 204799 | 55857771 ~ 55858007 (+) |
| G995540 | NA | non-coding | downstream | 217136 | 55870108 ~ 55870444 (+) |
| G995364 | NA | other | upstream | 132786 | 55518709 ~ 55519174 (+) |
| G995268 | NA | other | upstream | 294844 | 55355201 ~ 55357116 (+) |
| slc20a1a | s20aa | other | upstream | 608551 | 55036382 ~ 55043511 (+) |
| G993738 | NA | other | upstream | 1425497 | 54226131 ~ 54226463 (+) |
| G995607 | NA | other | downstream | 349882 | 56002854 ~ 56004867 (+) |
| LOC110536010 | LOC106579856 | other | downstream | 375199 | 56028141 ~ 56037300 (+) |
| LOC110536021 | LOC106579845 | other | downstream | 733547 | 56386314 ~ 56434657 (+) |
| LOC110536038 | LOC106579834 | other | downstream | 1399137 | 57044708 ~ 57072429 (+) |
| G997824 | NA | other | downstream | 2134496 | 57787468 ~ 57789171 (+) |
