G995500


Basic Information

Item Value
gene id G995500
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 55777539 ~ 55844504 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1132921
ccaaaatagagacataaaaagctgtAAGGTCAGGCTGTGACAAGCAGAGGTAaattccattcctgtggcggtcatcatgagagccagtttcatcatagcacttgatgatttttgcgattgcacttgaagaaactttcaaagttcttgaagtaatgatggactgtcgtttctctttgcttatttgagctgttcttgtcataatatggatttggtcttttaccaaatagggctatcttctgtatacacaccctaccttgtcacaacacaactgattggcTCTTTCTCTTATACA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1132921 True 292 lncRNA 0.39 2 55777539 55844504

Neighbor

gene id symbol gene type direction distance location
fgfr1a LOC106579865 coding upstream 13844 55722752 ~ 55763695 (+)
ankrd39 ankrd39 coding upstream 70781 55691790 ~ 55706758 (+)
LOC110535066 gnrh1 coding upstream 85799 55690752 ~ 55691740 (+)
LOC110535997 LOC106579866 coding upstream 87408 55683843 ~ 55690131 (+)
LOC110535996 LOC106585571 coding upstream 96852 55676136 ~ 55680687 (+)
LOC110536010 LOC106579856 coding downstream 183637 56028141 ~ 56037300 (+)
egr3 LOC106579855 coding downstream 282648 56127152 ~ 56136999 (+)
bin3 LOC106585344 coding downstream 293043 56137547 ~ 56175403 (+)
ubl4a LOC106579850 coding downstream 398475 56242979 ~ 56246219 (+)
si:dkey-32e23.4 dnm1l coding downstream 403429 56247933 ~ 56266701 (+)
G995462 NA non-coding upstream 68241 55708382 ~ 55709298 (+)
G995430 NA non-coding upstream 124567 55651960 ~ 55652972 (+)
G995436 NA non-coding upstream 141165 55636175 ~ 55636374 (+)
G995402 NA non-coding upstream 178507 55597394 ~ 55599032 (+)
tbx16 LOC106579871 non-coding upstream 187247 55587364 ~ 55590671 (+)
G995531 NA non-coding downstream 13267 55857771 ~ 55858007 (+)
G995540 NA non-coding downstream 25604 55870108 ~ 55870444 (+)
G995541 NA non-coding downstream 26303 55870807 ~ 55968382 (+)
G995751 NA non-coding downstream 388079 56232583 ~ 56232918 (+)
G995699 LOC106578697 non-coding downstream 389485 56233989 ~ 56234484 (+)
G995364 NA other upstream 258365 55518709 ~ 55519174 (+)
LOC110535064 cabin1 other upstream 265329 55489662 ~ 55577699 (+)
G995268 NA other upstream 420423 55355201 ~ 55357116 (+)
slc20a1a s20aa other upstream 734130 55036382 ~ 55043511 (+)
G993738 NA other upstream 1551076 54226131 ~ 54226463 (+)
G995607 NA other downstream 158350 56002854 ~ 56004867 (+)
LOC110536021 LOC106579845 other downstream 542015 56386314 ~ 56434657 (+)
LOC110536038 LOC106579834 other downstream 1207605 57044708 ~ 57072429 (+)
G997824 NA other downstream 1942964 57787468 ~ 57789171 (+)

Expression


Co-expression Network