G995541


Basic Information

Item Value
gene id G995541
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 55870807 ~ 55968382 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1132970
gtattaacttaagggggctgaataattttgcacggccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccatttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatatttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtaaattgaaTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1132970 True 237 lncRNA 0.34 2 55870807 55968382

Neighbor

gene id symbol gene type direction distance location
slc25a37 slc25a37 coding upstream 18014 55842033 ~ 55852793 (+)
entpd4 LOC106579862 coding upstream 52968 55809180 ~ 55817839 (+)
chmp7 chmp7 coding upstream 67648 55800266 ~ 55803159 (+)
lgi3 LOC106579864 coding upstream 73941 55781341 ~ 55796866 (+)
fgfr1a LOC106579865 coding upstream 107112 55722752 ~ 55763695 (+)
LOC110536010 LOC106579856 coding downstream 59759 56028141 ~ 56037300 (+)
egr3 LOC106579855 coding downstream 158770 56127152 ~ 56136999 (+)
bin3 LOC106585344 coding downstream 169165 56137547 ~ 56175403 (+)
ubl4a LOC106579850 coding downstream 274597 56242979 ~ 56246219 (+)
si:dkey-32e23.4 dnm1l coding downstream 279551 56247933 ~ 56266701 (+)
G995540 NA non-coding upstream 363 55870108 ~ 55870444 (+)
G995531 NA non-coding upstream 12800 55857771 ~ 55858007 (+)
G995500 NA non-coding upstream 26303 55777539 ~ 55844504 (+)
G995466 NA non-coding upstream 64730 55805288 ~ 55806077 (+)
G995462 NA non-coding upstream 161509 55708382 ~ 55709298 (+)
G995751 NA non-coding downstream 264201 56232583 ~ 56232918 (+)
G995699 LOC106578697 non-coding downstream 265607 56233989 ~ 56234484 (+)
G995760 NA non-coding downstream 316421 56284803 ~ 56287035 (+)
G995776 NA non-coding downstream 320027 56288409 ~ 56290216 (+)
G995782 LOC106579847 non-coding downstream 328873 56297255 ~ 56326423 (+)
G995364 NA other upstream 351633 55518709 ~ 55519174 (+)
LOC110535064 cabin1 other upstream 358597 55489662 ~ 55577699 (+)
G995268 NA other upstream 513691 55355201 ~ 55357116 (+)
slc20a1a s20aa other upstream 827398 55036382 ~ 55043511 (+)
G993738 NA other upstream 1644344 54226131 ~ 54226463 (+)
G995607 NA other downstream 34472 56002854 ~ 56004867 (+)
LOC110536021 LOC106579845 other downstream 418137 56386314 ~ 56434657 (+)
LOC110536038 LOC106579834 other downstream 1083727 57044708 ~ 57072429 (+)
G997824 NA other downstream 1819086 57787468 ~ 57789171 (+)

Expression


Co-expression Network