Gene
RNA
| Item | Value |
|---|---|
| gene id | G997081 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 56996640 ~ 56998729 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1134711 | False | 2090 | lncRNA | 0.43 | 1 | 56996640 | 56998729 |
| TU1134716 | True | 2035 | lncRNA | 0.43 | 1 | 56996695 | 56998729 |
56,993,600
56,994,000
56,994,400
56,994,800
56,995,200
56,995,600
56,996,000
56,996,400
56,996,800
56,997,200
56,997,600
56,998,000
56,998,400
56,998,800
56,999,200
56,999,600
57,000,000
57,000,400
57,000,800
57,001,200
57,001,600
NC_048575.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nkx6.3 | LOC106579836 | coding | upstream | 59196 | 56933972 ~ 56937444 (+) |
| LOC110536026 | LOC106580212 | coding | upstream | 280399 | 56713839 ~ 56716241 (+) |
| got1l1 | LOC106579841 | coding | upstream | 308515 | 56677407 ~ 56688125 (+) |
| LOC100136173 | LOC100136173 | coding | upstream | 326191 | 56654582 ~ 56670449 (+) |
| LOC110536021 | LOC106579845 | coding | upstream | 561983 | 56386314 ~ 56434657 (+) |
| LOC110536038 | LOC106579834 | coding | downstream | 45979 | 57044708 ~ 57072429 (+) |
| LOC110536043 | LOC106580381 | coding | downstream | 175567 | 57174296 ~ 57221198 (+) |
| LOC110536045 | NA | coding | downstream | 262817 | 57261546 ~ 57298041 (+) |
| LOC110536634 | NA | coding | downstream | 288995 | 57287724 ~ 57294198 (+) |
| LOC110536635 | NA | coding | downstream | 295592 | 57294321 ~ 57296546 (+) |
| G997078 | NA | non-coding | upstream | 8101 | 56988058 ~ 56988539 (+) |
| G997051 | NA | non-coding | upstream | 55976 | 56939053 ~ 56940664 (+) |
| G997045 | NA | non-coding | upstream | 66208 | 56929425 ~ 56930432 (+) |
| G997042 | NA | non-coding | upstream | 73088 | 56923345 ~ 56923552 (+) |
| G997040 | NA | non-coding | upstream | 77513 | 56918918 ~ 56919127 (+) |
| G997096 | NA | non-coding | downstream | 33241 | 57031970 ~ 57032234 (+) |
| G997098 | NA | non-coding | downstream | 34625 | 57033354 ~ 57033570 (+) |
| G997104 | NA | non-coding | downstream | 43083 | 57041812 ~ 57042045 (+) |
| G997109 | NA | non-coding | downstream | 49164 | 57047893 ~ 57048094 (+) |
| G997110 | LOC107579696 | non-coding | downstream | 49637 | 57048366 ~ 57048939 (+) |
| LOC110536010 | LOC106579856 | other | upstream | 964104 | 56028141 ~ 56037300 (+) |
| G995607 | NA | other | upstream | 991773 | 56002854 ~ 56004867 (+) |
| G995364 | NA | other | upstream | 1477466 | 55518709 ~ 55519174 (+) |
| LOC110535064 | cabin1 | other | upstream | 1484430 | 55489662 ~ 55577699 (+) |
| G997824 | NA | other | downstream | 788739 | 57787468 ~ 57789171 (+) |
| G998557 | LOC106588150 | other | downstream | 1302856 | 58301585 ~ 58302987 (+) |
| LOC110536086 | LOC106580340 | other | downstream | 2365172 | 59363887 ~ 59371838 (+) |
| LOC110535084 | lnpep | other | downstream | 4196362 | 61180837 ~ 61206347 (+) |
