XLOC_002888 (eva1c)


Basic Information

Item Value
gene id XLOC_002888
gene name eva1c
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 33580285 ~ 33588310 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005334
AAACACGTCCTGGTACCATAAGAAGTCTCACCGGTGACCACAAAACCATCAACAACCGAATAACAATGCAAAGTCGCCGGTTTTAGGAGAAAGGCTACCGAGGAGTTCGCTTTGGCTCTTGAGGACTGGGATGTCCGAGTCGCGGTATGAAGACATACTTTAGCCGGGTGAGAGTAACCGCAGGTGGGAGAGGAACACGGGAGTTTGTGACAGCGAGCGTTTCTCCAGCACGCGCTTGAATGCACGCGGATTTGATGCAGAAATAATTGCAGACTGTGACTATGATCTCAGCGCAGCACCTGAGAAGCTGCCGTGCACCTGGGCTCTGTCTTCAAATACTTTACAGTGTACTCATACTGTGGACCAAAGAGATGGACGGACTCTCGGATTTCTCAAATTATCTGTTTAGGATCATCAAAAGTCAATCAGCTCAAGCCTGTGATGGAGATCTGCTGATCCTCAAGTGTCCACGACACTCCACCATAACTATTCAGTCTGCATTTTATGGACAGAGTGAAACCCTGGTCGGACTTGAGCCAAGAATGAGATGCCAATGGCATAACCACAGCTGTTCTGCTTCCACAACACTGCAGAAAGTGCTTTCTGAATGCCAAGGTCACAGAGATTGCCAGTTTCTGGTTAATCATCAAGTCTTTGGCAAAGATCCTTGTCCAGGAATCCCTAAATACATCAATGTGTCATACAGGTGTAAACCTACTGAGCACAAGAGGAAAGTAACATGCGAGGGTGATCGACTTCTGCTGCACTGCAAGTATCCAAAAGTGCTGAATATCTACTCTGCTGTTTATGGCAGACTGTTGGAGGAGGAAGACTTGTGTTCATCTGAGGAACAAAAACCTCCGTATGAATGTCTTCATCATGGAGCTGTGGATGTGGTGTCCAACATCTGCTATGGCAAACAGAGGTGTTTGTTTACTGTGGATCAGAAACATTTCAAAGACCCCTGCCCTCCTGGAACAAAAAAGTATATCACCATCCTCTATGCATGcgTTCCACAAAGTTTACTCAAGGAGGCTGATCCCAGCAGTTTCCTGACTACCTCAATGCCTAGCCAAAGCACCAAAGAAGAACGTCCAGTTATCAGAAGCTCAAAGTTTCCAGAGGGCGGGATTATTTTAAGCAATGCTTTAATGGGATTTGGCTACATCACAGAGCATCCAGAGATGGCAGGACTACTCTTCACATCAAGTGTTTGCGTGGGCCTTCTGATAGTTCTAATAGCCGTTTCAACACAACTGACATGCAGTAGACATCTAAATACACCTAGAGCATTCAGAAAGAAGAGTAGAACTAACCTGGAAGAGGAAGAGCCAATGAACCAGGACAACAGtgaggaggaggatgatgaagatgataaaGGGTCACTGATGGACAGCTCTAACCTGTCAGAGATCGGCAGGAAGGTGTACTGCTGGGAAGACGTGACGTACACCACAGAGGCAGCTGATCTGATGGAGAGGATTGAGCGGCGAGAGCTAGTGATTCAGGAGATCAGGATGAACGCATACCTCAATGGAAACACATGCATCCTGCACTCAAACATGCCAACTGTTACACAAAACGTACAATTGCTGTAATTTCAACCAAACTGAGTGAAATTTTGGGAATGTTTTATGTTACCAAAACACTAAATTAAAGGTGATGTGTGAAACTTC
>TCONS_00005335
GAGAAAGGCTACCGAGGAGTTCGCTTTGGCTCTTGAGGACTGGGATGTCCGAGTCGCGGTATGAAGACATACTTTAGCCGGGTGAGAGTAACCGCAGGTGGGAGAGGAACACGGGAGTTTGTGACAGCGAGCGTTTCTCCAGCACGCGCTTGAATGCACGCGGATTTGATGCAGAAATAATTGCAGACTGTGACTATGATCTCAGCGCAGCACCTGAGAAGCTGCCGTGCACCTGGGCTCTGTCTTCAAATACTTTACAGTGTACTCATACTGTGGACCAAAGAGATGGACGGACTCTCGGATTTCTCAAATTATCTGTTTAGGATCATCAAAAGTCAATCAGCTCAAGCCTGTGATGGAGATCTGCTGATCCTCAAGTGTCCACGACACTCCACCATAACTATTCAGTCTGCATTTTATGGACAGAGTGAAACCCTGGTCGGACTTGAGCCAAGAATGAGATGCCAATGGCATAACCACAGCTGTTCTGCTTCCACAACACTGCAGAAAGTGCTTTCTGAATGCCAAGGTCACAGAGATTGCCAGTTTCTGGTTAATCATCAAGTCTTTGGCAAAGATCCTTGTCCAGGAATCCCTAAATACATCAATGTGTCATACAGGTGTAAACCTACTGAGCACAAGAGGAAAGTAACATGCGAGGGTGATCGACTTCTGCTGCACTGCAAGTATCCAAAAGTGCTGAATATCTACTCTGCTGTTTATGGCAGACTGTTGGAGGAGGAAGACTTGTGTTCATCTGAGGAACAAAAACCTCCGTATGAATGTCTTCATCATGGAGCTGTGGATGTGGTGTCCAACATCTGCTATGGCAAACAGAGGTGTTTGTTTACTGTGGATCAGAAACATTTCAAAGACCCCTGCCCTCCTGGAACAAAAAAGTATATCACCATCCTCTATGCATGcgTTCCACAAAGTTTACTCAAGGAGGCTGATCCCAGCAGTTTCCTGACTACCTCAATGCCTAGCCAAAGCACCAAAGAAGAACGTCCAGTTATCAGAAGCTCAAAGTTTCCAGAGGGCGGGATTATTTTAAGCAATGCTTTAATGGGATTTGGCTACATCACAGAGCATCCAGAGATGGCAGGACTACTCTTCACATCAAGTGTTTGCGTGGGCCTTCTGATAGTTCTAATAGCCGTTTCAACACAACTGACATGCAGTAGACATCTAAATACACCTAGAGCATTCAGAAAGAAGAGTAGAACTAACCTGGAAGAGGAAGAGCCAATGAACCAGGACAACAGtgaggaggaggatgatgaagatgataaaGGGTCACTGATGGACAGCTCTAACCTGTCAGAGATCGGCAGGAAGGTGTACTGCTGGGAAGACGTGACGTACACCACAGAGGCAGCTGATCTGATGGAGAGGATTGAGCGGCGAGAGCTAGTGATTCAGGAGATCAGGATGAACGCATACCTCAATGGAAACACATGCATCCTGCACTCAAACATGCCAACTGTTACACAAAACGTACAATTGCTGTAA

Function

symbol description
eva1c Predicted to enable heparin binding activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to colocalize with extracellular region. Orthologous to human EVA1C (eva-1 homolog C).

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0008201 heparin binding molecular_function
GO:0030246 carbohydrate binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-091204-329 Predicted to enable heparin binding activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to colocalize with extracellular region. Orthologous to human EVA1C (eva-1 homolog C).

Ensembl:

ensembl_id ENSDARG00000056024

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005334 False 1676 mRNA 0.46 9 33580285 33588310
TCONS_00005335 True 1512 mRNA 0.47 8 33580363 33588106

Neighbor

gene id symbol gene type direction distance location
XLOC_002887 si:dkey-18a10.3 coding downstream 7844 33561567 ~ 33572441 (-)
XLOC_002886 il2rga coding downstream 22986 33544329 ~ 33557299 (-)
XLOC_002882 ska2 coding downstream 200435 33367355 ~ 33379850 (-)
XLOC_002889 hunk coding upstream 26067 33614377 ~ 33621739 (-)
XLOC_002890 NA coding upstream 74855 33663165 ~ 33664789 (-)
XLOC_002891 BX569785.1 coding upstream 287821 33876131 ~ 33880364 (-)
XLOC_002892 zar1l coding upstream 411559 33999869 ~ 34002185 (-)
XLOC_002893 rfc3 coding upstream 433058 34021368 ~ 34033680 (-)
XLOC_002885 dre-mir-130a non-coding downstream 203071 33377130 ~ 33377214 (-)
XLOC_002884 dre-mir-301a non-coding downstream 203199 33377001 ~ 33377086 (-)
XLOC_002883 dre-mir-454a non-coding downstream 203344 33376818 ~ 33376941 (-)
XLOC_002877 NA non-coding downstream 415712 33158589 ~ 33164573 (-)
XLOC_002875 NA non-coding downstream 683341 32894997 ~ 32896944 (-)
XLOC_002900 NA non-coding upstream 608472 34196782 ~ 34198566 (-)
XLOC_002902 BX510654.1 non-coding upstream 738952 34327262 ~ 34327394 (-)
XLOC_002906 CT573139.2 non-coding upstream 1362750 34951060 ~ 34959178 (-)

Expression


Co-expression Network