G998486


Basic Information

Item Value
gene id G998486
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 58227307 ~ 58227579 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1136232
ggttgaacaggctagtaataggggtggcaacaattttggcagataattttagaaagaaagggtccagattgtctagcccggctgatttgtaggggtccagattttgcagctcattcagaacatcagctgagcagatttgggagaaggagaaatggggaaggcttgggcgagttgttgtggggggtgcagtgctgtttaccggggtaggagtagccaggtggaaagcatggccagccgtagaaaaatgcttattgaaattctcaattatggtgg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1136232 True 273 lncRNA 0.48 1 58227307 58227579

Neighbor

gene id symbol gene type direction distance location
LOC110536048 LOC106580394 coding upstream 10007 58213243 ~ 58217300 (+)
LOC110536635 NA coding upstream 930761 57294321 ~ 57296546 (+)
LOC110536634 NA coding upstream 933109 57287724 ~ 57294198 (+)
LOC110536045 NA coding upstream 954749 57261546 ~ 57298041 (+)
LOC110536043 LOC106580381 coding upstream 1006109 57174296 ~ 57221198 (+)
LOC110536052 vps33a coding downstream 135426 58363005 ~ 58378703 (+)
LOC110536057 tmed2 coding downstream 157259 58384838 ~ 58388400 (+)
LOC110536055 rabx5 coding downstream 174333 58401912 ~ 58406665 (+)
LOC110536058 psmd9 coding downstream 179362 58406941 ~ 58411547 (+)
cfap251 wdr66 coding downstream 184074 58411653 ~ 58421796 (+)
G998483 NA non-coding upstream 1213 58225852 ~ 58226094 (+)
G998482 NA non-coding upstream 2804 58224180 ~ 58224503 (+)
G998013 NA non-coding upstream 118302 58108652 ~ 58109005 (+)
G998012 NA non-coding upstream 119082 58108004 ~ 58108225 (+)
G998010 NA non-coding upstream 121579 58105518 ~ 58105728 (+)
G998493 NA non-coding downstream 7390 58234969 ~ 58235177 (+)
G998502 NA non-coding downstream 16416 58243995 ~ 58244878 (+)
G998503 NA non-coding downstream 18192 58245771 ~ 58246048 (+)
G998504 NA non-coding downstream 18647 58246226 ~ 58246745 (+)
G998515 NA non-coding downstream 29511 58257090 ~ 58257368 (+)
G997824 NA other upstream 438136 57787468 ~ 57789171 (+)
LOC110536038 LOC106579834 other upstream 1163727 57044708 ~ 57072429 (+)
LOC110536021 LOC106579845 other upstream 1794036 56386314 ~ 56434657 (+)
LOC110536010 LOC106579856 other upstream 2194771 56028141 ~ 56037300 (+)
G995607 NA other upstream 2222440 56002854 ~ 56004867 (+)
G998557 LOC106588150 other downstream 74006 58301585 ~ 58302987 (+)
LOC110536086 LOC106580340 other downstream 1136322 59363887 ~ 59371838 (+)
LOC110535084 lnpep other downstream 2967512 61180837 ~ 61206347 (+)
LOC110536169 LOC106580482 other downstream 3559684 61787232 ~ 61802788 (+)
G1002117 NA other downstream 4073598 62301177 ~ 62302835 (+)

Expression


Co-expression Network