Gene
RNA
| Item | Value |
|---|---|
| gene id | G998784 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 58570798 ~ 58571059 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1136576 | True | 262 | lncRNA | 0.35 | 1 | 58570798 | 58571059 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535072 | b3gnt4 | coding | upstream | 67325 | 58502454 ~ 58503473 (+) |
| LOC110535071 | b3gnt4 | coding | upstream | 70523 | 58497985 ~ 58500275 (+) |
| LOC118936378 | b3gnt4 | coding | upstream | 74326 | 58492698 ~ 58496472 (+) |
| LOC110536059 | lrrc43 | coding | upstream | 75653 | 58473709 ~ 58495145 (+) |
| LOC110536054 | mlxip | coding | upstream | 103148 | 58429295 ~ 58467650 (+) |
| si:ch211-110p13.9 | LOC106580363 | coding | downstream | 9195 | 58580254 ~ 58582889 (+) |
| kntc1 | kntc1 | coding | downstream | 48788 | 58619847 ~ 58641904 (+) |
| hip1rb | hip1r | coding | downstream | 78694 | 58649753 ~ 58690358 (+) |
| LOC110536067 | LOC106580357 | coding | downstream | 121034 | 58692093 ~ 58720484 (+) |
| rilpl2 | LOC106580358 | coding | downstream | 149881 | 58720940 ~ 58724224 (+) |
| G998570 | NA | non-coding | upstream | 218018 | 58332492 ~ 58352780 (+) |
| G998515 | NA | non-coding | upstream | 313430 | 58257090 ~ 58257368 (+) |
| G998504 | NA | non-coding | upstream | 324053 | 58246226 ~ 58246745 (+) |
| G998503 | NA | non-coding | upstream | 324750 | 58245771 ~ 58246048 (+) |
| G998502 | NA | non-coding | upstream | 325920 | 58243995 ~ 58244878 (+) |
| G998786 | NA | non-coding | downstream | 6886 | 58577945 ~ 58580187 (+) |
| G998785 | NA | non-coding | downstream | 13265 | 58584324 ~ 58585106 (+) |
| G998846 | NA | non-coding | downstream | 104690 | 58675749 ~ 58682620 (+) |
| LOC110536071 | pitpnm2 | non-coding | downstream | 191832 | 58762601 ~ 58851319 (+) |
| G998557 | LOC106588150 | other | upstream | 267811 | 58301585 ~ 58302987 (+) |
| G997824 | NA | other | upstream | 781627 | 57787468 ~ 57789171 (+) |
| LOC110536038 | LOC106579834 | other | upstream | 1507218 | 57044708 ~ 57072429 (+) |
| LOC110536021 | LOC106579845 | other | upstream | 2137527 | 56386314 ~ 56434657 (+) |
| LOC110536010 | LOC106579856 | other | upstream | 2538262 | 56028141 ~ 56037300 (+) |
| LOC110536086 | LOC106580340 | other | downstream | 792842 | 59363887 ~ 59371838 (+) |
| LOC110535084 | lnpep | other | downstream | 2624032 | 61180837 ~ 61206347 (+) |
| LOC110536169 | LOC106580482 | other | downstream | 3216204 | 61787232 ~ 61802788 (+) |
| G1002117 | NA | other | downstream | 3730118 | 62301177 ~ 62302835 (+) |
| LOC110536190 | LOC103397138 | other | downstream | 3920122 | 62490915 ~ 62494341 (+) |
