Gene
RNA
| Item | Value |
|---|---|
| gene id | G999278 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 58996136 ~ 58998177 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1137133 | True | 1110 | lncRNA | 0.41 | 2 | 58996136 | 58998177 |
58,993,600
58,994,000
58,994,400
58,994,800
58,995,200
58,995,600
58,996,000
58,996,400
58,996,800
58,997,200
58,997,600
58,997,600
58,998,000
58,998,400
58,998,800
58,999,200
58,999,600
59,000,000
59,000,400
59,000,800
59,001,200
59,001,600
NC_048575.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536078 | LOC106580350 | coding | downstream | 36376 | 58954818 ~ 58959760 (-) |
| mthfd2 | LOC106580352 | coding | downstream | 128616 | 58860624 ~ 58867520 (-) |
| arl6ip4 | arl6ip4 | coding | downstream | 135827 | 58858340 ~ 58860309 (-) |
| c11h12orf65 | cssa20h12orf65 | coding | downstream | 240195 | 58749568 ~ 58755941 (-) |
| LOC118937371 | LOC106580358 | coding | downstream | 269360 | 58721086 ~ 58726776 (-) |
| LOC110536083 | LOC106580345 | coding | upstream | 45905 | 59044082 ~ 59047563 (-) |
| LOC110536087 | LOC106580334 | coding | upstream | 376939 | 59375116 ~ 59378354 (-) |
| dguok | dguok | coding | upstream | 380448 | 59378625 ~ 59384566 (-) |
| LOC101268953 | LOC106580336 | coding | upstream | 386630 | 59384807 ~ 59389159 (-) |
| si:ch211-106a19.1 | LOC106580333 | coding | upstream | 422616 | 59420793 ~ 59502757 (-) |
| G999245 | NA | non-coding | downstream | 72234 | 58923611 ~ 58923902 (-) |
| G999240 | NA | non-coding | downstream | 77437 | 58918401 ~ 58918699 (-) |
| G999237 | NA | non-coding | downstream | 81678 | 58913970 ~ 58914458 (-) |
| G999235 | NA | non-coding | downstream | 86230 | 58909691 ~ 58909906 (-) |
| G999230 | NA | non-coding | downstream | 96781 | 58899098 ~ 58899355 (-) |
| G999284 | LOC106580349 | non-coding | upstream | 2414 | 59000591 ~ 59003372 (-) |
| G999291 | NA | non-coding | upstream | 13085 | 59011262 ~ 59011468 (-) |
| G999701 | NA | non-coding | upstream | 15086 | 59013263 ~ 59013472 (-) |
| G999710 | NA | non-coding | upstream | 51957 | 59050134 ~ 59050930 (-) |
| G999724 | NA | non-coding | upstream | 66984 | 59065161 ~ 59065388 (-) |
| G999250 | LOC106580347 | other | downstream | 66093 | 58929290 ~ 58930043 (-) |
| G999055 | kntc1 | other | downstream | 362487 | 58632891 ~ 58633649 (-) |
| G998183 | NA | other | downstream | 1263253 | 57727295 ~ 57732883 (-) |
| LOC110536040 | LOC106579832 | other | downstream | 1899833 | 57088502 ~ 57096328 (-) |
| G999829 | NA | other | upstream | 331616 | 59329793 ~ 59332126 (-) |
| LOC110536116 | ssh1 | other | upstream | 1391219 | 60389339 ~ 60452061 (-) |
| G1001167 | NA | other | upstream | 1595718 | 60593895 ~ 60603171 (-) |
| G1001204 | NA | other | upstream | 1765196 | 60763373 ~ 60770054 (-) |
| G1001364 | NA | other | upstream | 1990645 | 60988822 ~ 60989116 (-) |
