Gene
RNA
| Item | Value |
|---|---|
| gene id | G999487 |
| gene name | LOC106580334 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 59376430 ~ 59376676 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| nodal homolog |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1137384 | True | 247 | lncRNA | 0.53 | 1 | 59376430 | 59376676 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536086 | LOC106580340 | coding | upstream | 4981 | 59363887 ~ 59371838 (+) |
| LOC110536085 | LOC106580341 | coding | upstream | 13015 | 59172559 ~ 59363415 (+) |
| LOC118937474 | NA | coding | upstream | 109120 | 59267256 ~ 59267310 (+) |
| LOC110536084 | LOC106580343 | coding | upstream | 255534 | 59082752 ~ 59120896 (+) |
| LOC110536636 | NA | coding | upstream | 297740 | 59074038 ~ 59078690 (+) |
| LOC110536090 | LOC106580338 | coding | downstream | 12524 | 59389200 ~ 59393203 (+) |
| trnaa-ugc-51 | NA | coding | downstream | 139445 | 59516121 ~ 59516196 (+) |
| rhbdd3 | rhbdd3 | coding | downstream | 269149 | 59645825 ~ 59650996 (+) |
| LOC110536104 | LOC106580322 | coding | downstream | 463702 | 59840378 ~ 59848113 (+) |
| LOC110536105 | LOC106580320 | coding | downstream | 506853 | 59883529 ~ 59931922 (+) |
| G999316 | NA | non-coding | upstream | 315798 | 59060379 ~ 59060632 (+) |
| G999313 | NA | non-coding | upstream | 333013 | 59043098 ~ 59043417 (+) |
| G999305 | NA | non-coding | upstream | 345557 | 59030541 ~ 59030873 (+) |
| G999301 | NA | non-coding | upstream | 350738 | 59025393 ~ 59025692 (+) |
| G999374 | NA | non-coding | downstream | 8136 | 59384812 ~ 59385587 (+) |
| G999495 | NA | non-coding | downstream | 25115 | 59401791 ~ 59402224 (+) |
| G999496 | NA | non-coding | downstream | 25782 | 59402458 ~ 59402819 (+) |
| G999476 | NA | non-coding | downstream | 38740 | 59415416 ~ 59416733 (+) |
| G999477 | NA | non-coding | downstream | 42009 | 59418685 ~ 59419194 (+) |
| G998557 | LOC106588150 | other | upstream | 1073443 | 58301585 ~ 58302987 (+) |
| G997824 | NA | other | upstream | 1587259 | 57787468 ~ 57789171 (+) |
| LOC110536038 | LOC106579834 | other | upstream | 2312850 | 57044708 ~ 57072429 (+) |
| LOC110536021 | LOC106579845 | other | upstream | 2943159 | 56386314 ~ 56434657 (+) |
| LOC110535084 | lnpep | other | downstream | 1818415 | 61180837 ~ 61206347 (+) |
| LOC110536169 | LOC106580482 | other | downstream | 2410587 | 61787232 ~ 61802788 (+) |
| G1002117 | NA | other | downstream | 2924501 | 62301177 ~ 62302835 (+) |
| LOC110536190 | LOC103397138 | other | downstream | 3114505 | 62490915 ~ 62494341 (+) |
| G1004025 | LOC106580455 | other | downstream | 4179289 | 63555965 ~ 63558816 (+) |
