XLOC_028890



Basic Information


Item Value
gene id XLOC_028890
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 31626266 ~ 31628100 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00057369
TAgcaatttatatgtattattacatcacagacaggaagtgacatcattgaGCTCTCTTTAACAGCACGGTGGAAAAGAAGGCGAgatatattgtcatttatttacattttttgatgttTATTATGGTTAGGAAGGGTACGGTCAAGCTTAACAATTCAACCCTGTAACGTAAAACTAAGATGGAGTATGATTGTTTTCTTAATGAAATGTTGGTTTTACAGCAAAAGCTTTGTGAAATGCTATTATTAAACTCAGTTTAGTCCGTTACAGGGTTGAGAATAACGGCTGTGCAAAtaagaataaaagagaaaataatataaagCTTTAATGGCTGAGGGGGGAAA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00057369 True 344 lncRNA 0.33 2 31626266 31628100

Neighbor


gene id symbol gene type direction distance location
XLOC_028889 NA coding downstream 68769 31555894 ~ 31557497 (-)
XLOC_028887 si:dkey-43f9.4 coding downstream 314311 31247968 ~ 31311955 (-)
XLOC_028886 NA coding downstream 379599 31245741 ~ 31246667 (-)
XLOC_028885 NA coding downstream 380667 31241123 ~ 31245599 (-)
XLOC_028884 BX571711.5 coding downstream 398639 31227559 ~ 31227627 (-)
XLOC_028891 si:dkey-72l17.5 coding upstream 315731 31943831 ~ 31993242 (-)
XLOC_028892 NA coding upstream 329030 31957130 ~ 31960108 (-)
XLOC_028893 BX649328.2 coding upstream 413994 32042094 ~ 32042540 (-)
XLOC_028894 BX649328.3 coding upstream 468711 32096811 ~ 32097405 (-)
XLOC_028895 si:dkey-72l17.6 coding upstream 546037 32174137 ~ 32180155 (-)
XLOC_028883 BX571711.19 non-coding downstream 401616 31224544 ~ 31224650 (-)
XLOC_028897 CR450785.15 non-coding upstream 628172 32256272 ~ 32256435 (-)
XLOC_028898 CR450785.7 non-coding upstream 629482 32257582 ~ 32257730 (-)
XLOC_028901 BX324003.1 non-coding upstream 1088754 32716854 ~ 32718201 (-)

Expression



Co-expression Network