G999496


Basic Information

Item Value
gene id G999496
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 59402458 ~ 59402819 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1137393
caaaagttatgtgtaataacacataacacacacaaaaaaaaatctgggctaataatgtaagaaataacacacaaaaaaaatactgcaaagttgcttagcagctaaaagcagagctgccatgtctgtcagtGCCATCTTACTTCATAAACTGTACATTATATGTTGTCATTTATGTAGTGATCTCTAGATGCTAGTTCAGGAGGTGGTAGGCCTCTCATCATCTGCTCCATGTTCCTGCGCAGTCTCTGTAGCTTAGCTTGGTGCTCCTCTCTCAAGGACCTACTCAATACAGTCAGAGCAGACACCTGCTCCCTCTGCTGCACAAGGCACTCACTCTCCAGGTCCTGCACACTCTGACAGAG

Function

NR:

description
trichohyalin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1137393 True 362 lncRNA 0.43 1 59402458 59402819

Neighbor

gene id symbol gene type direction distance location
LOC110536090 LOC106580338 coding upstream 9255 59389200 ~ 59393203 (+)
LOC110536086 LOC106580340 coding upstream 31009 59363887 ~ 59371838 (+)
LOC110536085 LOC106580341 coding upstream 39043 59172559 ~ 59363415 (+)
LOC118937474 NA coding upstream 135148 59267256 ~ 59267310 (+)
LOC110536084 LOC106580343 coding upstream 281562 59082752 ~ 59120896 (+)
trnaa-ugc-51 NA coding downstream 113302 59516121 ~ 59516196 (+)
rhbdd3 rhbdd3 coding downstream 243006 59645825 ~ 59650996 (+)
LOC110536104 LOC106580322 coding downstream 437559 59840378 ~ 59848113 (+)
LOC110536105 LOC106580320 coding downstream 480710 59883529 ~ 59931922 (+)
LOC110536106 LOC106580319 coding downstream 572495 59975314 ~ 60109794 (+)
G999495 NA non-coding upstream 234 59401791 ~ 59402224 (+)
G999374 NA non-coding upstream 16871 59384812 ~ 59385587 (+)
G999487 LOC106580334 non-coding upstream 25782 59376430 ~ 59376676 (+)
G999316 NA non-coding upstream 341826 59060379 ~ 59060632 (+)
G999476 NA non-coding downstream 12597 59415416 ~ 59416733 (+)
G999477 NA non-coding downstream 15866 59418685 ~ 59419194 (+)
G999478 NA non-coding downstream 18044 59420863 ~ 59421573 (+)
G999506 NA non-coding downstream 25121 59427940 ~ 59429682 (+)
G999566 NA non-coding downstream 120169 59522988 ~ 59523326 (+)
G998557 LOC106588150 other upstream 1099471 58301585 ~ 58302987 (+)
G997824 NA other upstream 1613287 57787468 ~ 57789171 (+)
LOC110536038 LOC106579834 other upstream 2338878 57044708 ~ 57072429 (+)
LOC110536021 LOC106579845 other upstream 2969187 56386314 ~ 56434657 (+)
LOC110535084 lnpep other downstream 1792272 61180837 ~ 61206347 (+)
LOC110536169 LOC106580482 other downstream 2384444 61787232 ~ 61802788 (+)
G1002117 NA other downstream 2898358 62301177 ~ 62302835 (+)
LOC110536190 LOC103397138 other downstream 3088362 62490915 ~ 62494341 (+)
G1004025 LOC106580455 other downstream 4153146 63555965 ~ 63558816 (+)

Expression


Co-expression Network