XLOC_028901 (BX324003.1)


Basic Information

Item Value
gene id XLOC_028901
gene name BX324003.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 32716854 ~ 32718201 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00055958
cctcagtccagaggttcatgaACAGATAGCAGCAGAaGTCTGTGATaccattctcacacacacactggagcgGTTCTCCTTCACAGACCACCTCGTTAGTGCCACATTGCTGCAGGCAGACAGGTTTGAGCAGTATACAGTAGCTTTTCCAGAAGATGCACTTAGCAGGACTCTGAAAGTCTATCCTGTGCTCGATGGAAGTAAGCTAAAGACAGAGCTCAGTCTCATCTACTCCAAGGATGAGAAGTCTTTTCAGAGACTGTAACTCTCCTAAAGATTCTGGTAACTACGCCTATGACCACAGCAGAAGCTGAGAGGTGCTTCTCAACTTTGAAAAGAATAAAAACTTTTCTGAGAAACAGCATGACCCAAGAGAGGCTGAATGCATTGGCCATGCTGTCAATAGAGAAGAGACTAGTGACTGAGATGACTGACTTCAACCAAAAGGTCATTGAGAAATTTGCAAGCCAGAAAGAAAGGAgagcaaaatttattttcaagtaGTGCTACTGGCCAGTAATTAGGCAACATctatgtgtgtctgtgcgtgtgtttatTGATTACTTCATTACTTATAATAAACCTAAATTGA
>TCONS_00058251
GAAGGACATCGATTCAGTCCACATCAGGGGGAGCATCCAGCAATTCCAGCAGGACATACAGAAGATCAggtagttgctgtttttttgttttggatttattatgattattactaatattattattattattcatacacTTTCTTATTCCTTTACAGAAATTCTCTCCATTCCCTGGTTGACCAATGCAGTGAAGGTGGTTTTCAACAGAAGAGGCGGCGGTccctcagtccagaggttcatgaACAGATAGCAGCAGAagtgagtttttattttaatcaaaatgaaacaaTACAGTTTAATTTGTTGCAAGCACACTGGCTTGTTTATATGATACAATGACCAGGTCTTTTTCAAATAGGAGTCTTTAAGTGTCTCATTATAGAAGCATTATATAAAAATAGTTGATAAGAATTTTGAATCTAAGTGTTGTTGATTTATAAGCTGGGAATAGTGGGCTGTATAAAACTatgataaatgtaaatgcatttttatgaCTAGGTGATCTTCTTAAACGTATATACTCTTTAAACTATTATCTAAAATGATTTGTTATTCTTCAGTTTCTTCTAGTGGAGCTTGACATGTTTACTAAGAATGAATGTGTTTATGAGGTTTTGAGAAAGTATGAATTTAACCACTACAACTGGTCTGCCTTTATAACTCAACCTGGTTATTTTAATGTAGCAGTTGAAATTGACacataattacataatttttGTCTTTATCCTTTAGGTCTGTGATaccattctcacacacacactggagcgGTTCTCCTTCACAGACCACCTCGTTAGTGCCACATTGCTGCAGGCAGACAGGTTTGAGCAGTATACAGTAGCTTTTCCAGAAGATGCACTTAGCAGGACTCTGAAAGTCTATCCTGT

Function

GO:

id name namespace
GO:0070373 negative regulation of ERK1 and ERK2 cascade biological_process

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096499

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00055958 False 592 lncRNA 0.43 3 32716854 32717980
TCONS_00058251 True 884 lncRNA 0.35 1 32717318 32718201

Neighbor

gene id symbol gene type direction distance location
XLOC_028899 si:dkey-16p6.1 coding downstream 70460 32429579 ~ 32646394 (-)
XLOC_028900 znf1085 coding downstream 245355 32467854 ~ 32471499 (-)
XLOC_028898 CR450785.7 coding downstream 459124 32257582 ~ 32257730 (-)
XLOC_028897 CR450785.15 coding downstream 460419 32256272 ~ 32256435 (-)
XLOC_028896 CR450785.11 coding downstream 523986 32191378 ~ 32192868 (-)
XLOC_028902 NA coding upstream 39995 32758196 ~ 32897133 (-)
XLOC_028903 BX324003.2 coding upstream 106649 32824850 ~ 32888436 (-)
XLOC_028904 si:dkeyp-4f2.1 coding upstream 339643 33057844 ~ 33073382 (-)
XLOC_028905 NA coding upstream 409814 33128015 ~ 33135638 (-)
XLOC_028906 si:ch211-162i8.4 coding upstream 461153 33179354 ~ 33189070 (-)
XLOC_028893 BX649328.2 non-coding downstream 674314 32042094 ~ 32042540 (-)
XLOC_028892 NA non-coding downstream 756746 31957130 ~ 31960108 (-)
XLOC_028890 NA non-coding downstream 1088754 31626266 ~ 31628100 (-)
XLOC_028909 CT027578.1 non-coding upstream 672021 33390222 ~ 33390384 (-)
XLOC_028910 CT027578.2 non-coding upstream 673574 33391775 ~ 33391921 (-)
XLOC_028912 NA non-coding upstream 699347 33417548 ~ 33446814 (-)

Expression


Co-expression Network