XLOC_028911 (si:dkeyp-4f2.3)


Basic Information

Item Value
gene id XLOC_028911
gene name si:dkeyp-4f2.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 33399196 ~ 33405483 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00055968
aaaaaagcgaaagaaaataaagacttttattttgtcgtgacgtgtgacgtcatcaggatgcgccgcttcagcgctgtgattcaactggagaaaggacaatGTGTCAAAACgtagagaaaaactcctgctgaatcgactgatctccacactgttataaagatggcgtttattaaagaggagagtgaagatgtgaagattgaagaaacattcacagtcaaacaggaagatttgcaggaacaaacagatctaattgaagagaatgaggggagtaaagaggaggaacatcatgtcaaaattgaggaaaaaactcgtttacagactgatgatattttgaaaaaaagagacgaaaatcgtttcacctgcactcagtgtggaaggaGTTTGGGAAGAAAAGacaatcttaagattcacatgaggatccacactggagagaaaccatttacatgcactcagtgtgggaagagtttcaaccgatcatcatcccttaatcaccacatgatgatccacgctcgagagaaaccattcacctgcactcagtgtgggaagagtttcagacactcattatttcttaaacaacacatgaggatccacattGGAgataaaccattcacatgcactcagtgtgggaagagtttcagccaatcatcatcccttaatcgccacatgaggatccacactggagagaaaccattcacatgcactcggtgtgggaaaagtttcagccATTCATCAAACTTTaaccgacacatgaggatccacactggagagaaaccattcacatgcactcagtgtgggaagagtttcagccaatcatcaaaccttaatctacacatgatgatccacactggagagaaaccattcacgtgcactcagtgtgggaagagtttcagttgcTCATCttaccttaatcaccacatgaggatccatacAGGAGAGAAACTATTATCATGCActcggtgtgggaagagtttcagtcgCTCATTATCTCTTAaagaacacatgaggatccacactggagagaaaccatttacatgcactcagtgtgggaagagtttcagccaatcatcatcccttaatcaccacatgtggacccacactggagagaaaccattcacatgcactcagtgtgggaagagtttcagccaatcatcaaactttaaccgacacatgaggatccacactggagagaaaccattcacttgcacctAAGCCACAGTTACACTGGACCTTTCTCCTTATAGACtgccattcatatgcacgcaaatgcgtcagactgtAAACTCAAGTTtgtgcgtcaagttttgcagttcactgcgttgcagagttcaagcttgatgaactctgaccagcgaaatcacat

Function

symbol description
si:dkeyp-4f2.3 Predicted to enable chromatin insulator sequence binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in chromosome.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000104584

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00055968 True 1360 mRNA 0.43 3 33399196 33405483

Neighbor

gene id symbol gene type direction distance location
XLOC_028910 CT027578.2 coding downstream 7275 33391775 ~ 33391921 (-)
XLOC_028909 CT027578.1 coding downstream 8812 33390222 ~ 33390384 (-)
XLOC_028908 si:dkeyp-4f2.3 coding downstream 27562 33364466 ~ 33371634 (-)
XLOC_028907 znf1000 coding downstream 67515 33310760 ~ 33331681 (-)
XLOC_028906 si:ch211-162i8.4 coding downstream 210126 33179354 ~ 33189070 (-)
XLOC_028912 NA coding upstream 12065 33417548 ~ 33446814 (-)
XLOC_028913 CT027801.2 coding upstream 118754 33524237 ~ 33525219 (-)
XLOC_028914 NA coding upstream 293243 33698726 ~ 33699784 (-)
XLOC_028915 si:ch211-197f20.1 coding upstream 315320 33720803 ~ 33763368 (-)
XLOC_028916 AL807749.2 coding upstream 391209 33796692 ~ 33808943 (-)
XLOC_028905 NA non-coding downstream 263558 33128015 ~ 33135638 (-)
XLOC_028902 NA non-coding downstream 502063 32758196 ~ 32897133 (-)
XLOC_028901 BX324003.1 non-coding downstream 680995 32716854 ~ 32718201 (-)
XLOC_028917 NA non-coding upstream 553892 33959375 ~ 33961465 (-)
XLOC_028918 CABZ01060112.2 non-coding upstream 561434 33966917 ~ 33967068 (-)

Expression


Co-expression Network