Gene
RNA
| Item | Value |
|---|---|
| gene id | G1003509 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 63022040 ~ 63022267 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1141839 | True | 228 | lncRNA | 0.34 | 1 | 63022040 | 63022267 |
63,020,800
63,021,200
63,021,600
63,022,000
63,022,400
63,022,800
63,023,200
63,023,600
63,024,000
63,024,400
63,024,800
NC_048575.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937456 | NA | coding | downstream | 13944 | 63006679 ~ 63008096 (-) |
| gpat2 | LOC106580447 | coding | downstream | 35603 | 62935274 ~ 62986437 (-) |
| zgc:152830 | LOC106580446 | coding | downstream | 94557 | 62920442 ~ 62927483 (-) |
| LOC110536211 | pcna | coding | downstream | 102239 | 62916347 ~ 62919801 (-) |
| LOC110536207 | LOC106580444 | coding | downstream | 142166 | 62804837 ~ 62879874 (-) |
| adra2b | LOC106580448 | coding | upstream | 224260 | 63246527 ~ 63253768 (-) |
| dusp2 | LOC106580476 | coding | upstream | 246358 | 63268625 ~ 63272680 (-) |
| LOC110535091 | izumo1 | coding | upstream | 253720 | 63275987 ~ 63278272 (-) |
| idua | idua | coding | upstream | 281669 | 63303936 ~ 63316827 (-) |
| LOC110536219 | LOC106580453 | coding | upstream | 297747 | 63320014 ~ 63347508 (-) |
| G1003498 | NA | non-coding | downstream | 28993 | 62992815 ~ 62993047 (-) |
| G1003496 | NA | non-coding | downstream | 33530 | 62988244 ~ 62988510 (-) |
| G1003495 | NA | non-coding | downstream | 33799 | 62988037 ~ 62988241 (-) |
| G1003400 | NA | non-coding | downstream | 312885 | 62704461 ~ 62709155 (-) |
| G1003398 | LOC106580440 | non-coding | downstream | 320122 | 62701616 ~ 62701918 (-) |
| G1003575 | NA | non-coding | upstream | 44346 | 63066613 ~ 63066818 (-) |
| G1003583 | NA | non-coding | upstream | 48273 | 63070540 ~ 63070754 (-) |
| G1003592 | NA | non-coding | upstream | 54990 | 63077257 ~ 63077488 (-) |
| G1003936 | NA | non-coding | upstream | 277806 | 63300073 ~ 63300415 (-) |
| G1003948 | NA | non-coding | upstream | 346393 | 63368660 ~ 63374498 (-) |
| LOC110536206 | LOC106580443 | other | downstream | 275792 | 62740236 ~ 62804200 (-) |
| LOC110536201 | LOC106580439 | other | downstream | 332718 | 62663428 ~ 62689389 (-) |
| LOC110536162 | NA | other | downstream | 1380609 | 61636026 ~ 61657316 (-) |
| mrps36 | LOC106580406 | other | downstream | 1426630 | 61592425 ~ 61595436 (-) |
| LOC110535085 | setbp1 | other | downstream | 1690833 | 61269833 ~ 61331394 (-) |
| G1004487 | NA | other | upstream | 779262 | 63801529 ~ 63802002 (-) |
| G1005628 | LOC106580457 | other | upstream | 1338497 | 64360764 ~ 64363777 (-) |
| G1006106 | NA | other | upstream | 2076693 | 65098960 ~ 65099556 (-) |
| G1007506 | NA | other | upstream | 3350375 | 66372642 ~ 66372949 (-) |
| G1009720 | NA | other | upstream | 4948804 | 67971071 ~ 67971328 (-) |
