XLOC_028914


Basic Information

Item Value
gene id XLOC_028914
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 33698726 ~ 33699784 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00058256
CATCTTAGAACCATCATTACAGGTCTTTGATCAAAGCCTATTTCTTGTATTTGGGTATACTCACTATATTTGAATATACCCAATTCGTGGTTCCATAAAGAATGTGTTTGAAGCTATTAAAAATTTGAGACtattcttaatattttagaaTCTTTTTATGGGGTAGAATATGTATGTTCTTCAACAAATTTGCTACAAACatacattgtttaatttatttttactttttacagaTTTGTCCAATTTGCCAGATCTCTTTCCCAACTGATGTCTTGCCTTTTCATGCAAGCATGTGTGGTGAAGGGTAAAGTTATGCTAAAAATTGTAGGATGACATGCCTTTAATACTAAAGGATTAGTTTGcacagtttgttttggttgtaTATATCTCGAGGGAGATGTATAAAGATCAGATGGAATGTAgggtaaaaaattaacaaaatagttttcTGGTGGActgtcttaaatttaaattaatgtgtTGGTTTCATAAACTGGGTCAGTAGTAGACATTATTAGATTTGATGTATGTAGCTTTTATAAGCCTTGCTTTGAGAAAATCATTACTGGTGACTTTTGACATTAATGACTTTGTCTGGCACTAGAGTCTAAGCCTTGTCTATGAAACTGGGCAAATGCTTTTAATATGCATGAAAATTTTTGAAGTGGCTTAATGAACAAAATTGAAATTGTTTGTGTCTTGCCTGTTTTAGAGAAAGGACTTTTGGTGACAATGATTCTTCATTCACTTTAAATACAGAAGAATTGCCAGGACCCTCAACTGCACAATCTTCAACATCCCTGTCTGCAGGTTAGACacaacacatttaatttttttttagtgctgttgtactgtaaaatgataagtgcatctttattcatttattctttcatcttttttgtattgttattcaACTATGCTTGTAAAATGGTATTTAGataaattgttcatttgatttCAGCATGGAAAAATGAAATTGACCCATTCAAATCATCTCGAATGTTCTGTGATGAGTTGCTCTCCATCAATTCACACTGTCCATTTCTATCATTACTCATC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00058256 True 1059 lncRNA 0.32 1 33698726 33699784

Neighbor

gene id symbol gene type direction distance location
XLOC_028913 CT027801.2 coding downstream 173507 33524237 ~ 33525219 (-)
XLOC_028912 NA coding downstream 251912 33417548 ~ 33446814 (-)
XLOC_028911 si:dkeyp-4f2.3 coding downstream 293243 33399196 ~ 33405483 (-)
XLOC_028910 CT027578.2 coding downstream 306805 33391775 ~ 33391921 (-)
XLOC_028909 CT027578.1 coding downstream 308342 33390222 ~ 33390384 (-)
XLOC_028915 si:ch211-197f20.1 coding upstream 21019 33720803 ~ 33763368 (-)
XLOC_028916 AL807749.2 coding upstream 96908 33796692 ~ 33808943 (-)
XLOC_028917 NA coding upstream 259591 33959375 ~ 33961465 (-)
XLOC_028918 CABZ01060112.2 coding upstream 267133 33966917 ~ 33967068 (-)
XLOC_028919 CABZ01060112.1 coding upstream 268426 33968210 ~ 33968352 (-)
XLOC_028905 NA non-coding downstream 563088 33128015 ~ 33135638 (-)
XLOC_028902 NA non-coding downstream 801593 32758196 ~ 32897133 (-)
XLOC_028920 CT025695.1 non-coding upstream 659391 34359175 ~ 34362421 (-)

Expression


Co-expression Network