Gene
RNA
| Item | Value |
|---|---|
| gene id | G1005824 |
| gene name | LOC106580466 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 64645913 ~ 64648075 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| tRNA (uracil-5-)-methyltransferase homolog A-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1144339 | True | 247 | lncRNA | 0.51 | 2 | 64645913 | 64648075 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536235 | LOC106580467 | coding | downstream | 3758 | 64636219 ~ 64642155 (-) |
| LOC110536230 | LOC106580464 | coding | downstream | 129585 | 64509358 ~ 64516328 (-) |
| LOC110536227 | LOC106580460 | coding | downstream | 172970 | 64448162 ~ 64472943 (-) |
| LOC110536222 | LOC106580456 | coding | downstream | 887493 | 63628512 ~ 63758420 (-) |
| atad1a | LOC106580455 | coding | downstream | 1086905 | 63552161 ~ 63559008 (-) |
| dgcr8 | LOC106580468 | coding | upstream | 10923 | 64658998 ~ 64668914 (-) |
| LOC110536236 | LOC106580470 | coding | upstream | 23934 | 64672009 ~ 64703007 (-) |
| LOC100653466 | LOC106580488 | coding | upstream | 456540 | 65104615 ~ 65113617 (-) |
| LOC110536248 | LOC106580495 | coding | upstream | 1292031 | 65940106 ~ 66043855 (-) |
| LOC110536255 | LOC106580502 | coding | upstream | 1588473 | 66236548 ~ 66248437 (-) |
| G1005800 | zdhhc8 | non-coding | downstream | 28438 | 64615414 ~ 64617475 (-) |
| G1005665 | NA | non-coding | downstream | 165961 | 64403448 ~ 64479952 (-) |
| G1005628 | LOC106580457 | non-coding | downstream | 284890 | 64360764 ~ 64363777 (-) |
| G1005626 | NA | non-coding | downstream | 287468 | 64358051 ~ 64358445 (-) |
| G1005406 | NA | non-coding | downstream | 588155 | 64055463 ~ 64057758 (-) |
| G1006094 | NA | non-coding | upstream | 438609 | 65086684 ~ 65086883 (-) |
| G1006098 | NA | non-coding | upstream | 443120 | 65091195 ~ 65091537 (-) |
| G1006104 | NA | non-coding | upstream | 449400 | 65097475 ~ 65097992 (-) |
| G1006327 | NA | non-coding | upstream | 625227 | 65273302 ~ 65274706 (-) |
| G1006448 | NA | non-coding | upstream | 753949 | 65402024 ~ 65402481 (-) |
| G1004487 | NA | other | downstream | 843911 | 63801529 ~ 63802002 (-) |
| LOC110536206 | LOC106580443 | other | downstream | 1899665 | 62740236 ~ 62804200 (-) |
| LOC110536201 | LOC106580439 | other | downstream | 1956591 | 62663428 ~ 62689389 (-) |
| LOC110536162 | NA | other | downstream | 3004482 | 61636026 ~ 61657316 (-) |
| G1006106 | NA | other | upstream | 450885 | 65098960 ~ 65099556 (-) |
| G1007506 | NA | other | upstream | 1724567 | 66372642 ~ 66372949 (-) |
| G1009720 | NA | other | upstream | 3322996 | 67971071 ~ 67971328 (-) |
| G1010443 | NA | other | upstream | 4039182 | 68687257 ~ 68687962 (-) |
| G1010922 | NA | other | upstream | 4468432 | 69116507 ~ 69119486 (-) |
