XLOC_028920 (CT025695.1)


Basic Information

Item Value
gene id XLOC_028920
gene name CT025695.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 34359175 ~ 34362421 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00055977
gtgacggctacggcgaagggctatgcgtcagcgccatagcatacgccggcgtttgacgcagaagtataaatcagccttaagtcaagaaccaaatgaaGCACCAGAGTACAGATTATGGAGGTATCTGAAGTTGAACTAACTGGAAGCAGGGAACCATACTAATAAAGTTCCTTAagcagGTTCCTTGTAAAGATTAACCCAGGGAAGGATCGAAAGTGGAGAAGACCAGATCAAGAAAGACTACATCAAGATATGCGGTCAGTTCAAAGGATGTTTTGCATTGGACTGTTTTTTTTGGCTTTGACCCTTGCTTGCCCCTGACCTCACTCTTGGACTGCCCTGTtggattttcagtttatttaattaaaaaaaaaatttttggatttttaaatatttaattgtaattatttaatgtaaatcaaaggcggcaacaccaaggctccaaaaatacaaatttattaaattaaaaaggctgacacagagcgtaaAATGTTTCGAGccgccggctcttcatcagacaaatAATTTTtcgttgtaattttttaaataatatgtttttgttaaatatgcgatttctgtgtttgttctgtctacTCGAACTTGTTTATCTGGTTTCTgtaattatcatttgtttatttgacccttGCCTCGCCTCTGATCTTGTTTTTGGATTGCCCTTCatatatctttttaattattGGTTCTAGTTATatggttataaaatatttgttaatttaattaatatgcattatattaaaaaatacatataaatatattttctgtgttttttt
>TCONS_00055978
gtgtaaatgagagtgtatgggtttttcccagagatgtgttgcagctggaagagtatctgctgcgtaaaaaatgctggataagttgactgttcattccactttggtgaccccagattaataaagggatgaagctgaaaaaaatgaatgaacacaaacccagtttttcctactatgttaatcaatagttacaggtttctaacattcttcaaaatatctgctttagtgtttaacagattcaaactgctttgaaacaagtagaggatgaataaatggtggcagaatagtaaactatatctttaaatgttttattctgtatgttatgtgtattcatatttgtcttgtcttttgtcatattgtccttttagctcagattgtgatggacctggaatgcgacaccagttactcttaaagcctgatttatacttctgcgtcaggggaccggcataacccacggcgcatgcaacgcgcgtggctgtgcatttatacttctgcgcgctgtctctgtcggtctgcattaacacttccgaaacgctagttggcagtgaggtttaaatgttcctctgtgtcgagtttcttcgctgcttttttgcttttcctgaacacttccgggatgtacaagtggctcaaactcgctcattttgaggcaggaaccggtggacgtacaacaactttaactatgagcagGTTCCTTGTAAAGATTAACCCAGGGAAGGATCGAAAGTGGAGAAGACCAGATCAAGAAAGACTACATCAAGATATGCGGTC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000105246

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00055977 False 791 lncRNA 0.34 3 34359175 34361549
TCONS_00055978 True 765 lncRNA 0.41 2 34360774 34362421

Neighbor

gene id symbol gene type direction distance location
XLOC_028919 CABZ01060112.1 coding downstream 390823 33968210 ~ 33968352 (-)
XLOC_028918 CABZ01060112.2 coding downstream 392107 33966917 ~ 33967068 (-)
XLOC_028917 NA coding downstream 397710 33959375 ~ 33961465 (-)
XLOC_028916 AL807749.2 coding downstream 550232 33796692 ~ 33808943 (-)
XLOC_028915 si:ch211-197f20.1 coding downstream 595807 33720803 ~ 33763368 (-)
XLOC_028921 CT025695.2 coding upstream 26731 34389152 ~ 34390120 (-)
XLOC_028922 si:ch211-64i20.3 coding upstream 81229 34443650 ~ 34480611 (-)
XLOC_028923 NA coding upstream 124551 34486972 ~ 34494646 (-)
XLOC_028924 NA coding upstream 157083 34519504 ~ 34520936 (-)
XLOC_028925 AL645691.2 coding upstream 190646 34553067 ~ 34589087 (-)
XLOC_028914 NA non-coding downstream 659391 33698726 ~ 33699784 (-)
XLOC_028927 NA non-coding upstream 435372 34797793 ~ 34799395 (-)

Expression


Co-expression Network