Gene
RNA
| Item | Value |
|---|---|
| gene id | G1006094 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 65086684 ~ 65086883 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1144620 | True | 200 | lncRNA | 0.48 | 1 | 65086684 | 65086883 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536236 | LOC106580470 | coding | downstream | 383677 | 64672009 ~ 64703007 (-) |
| dgcr8 | LOC106580468 | coding | downstream | 417770 | 64658998 ~ 64668914 (-) |
| LOC110536235 | LOC106580467 | coding | downstream | 444529 | 64636219 ~ 64642155 (-) |
| LOC110536230 | LOC106580464 | coding | downstream | 570356 | 64509358 ~ 64516328 (-) |
| LOC110536227 | LOC106580460 | coding | downstream | 613741 | 64448162 ~ 64472943 (-) |
| LOC100653466 | LOC106580488 | coding | upstream | 17732 | 65104615 ~ 65113617 (-) |
| LOC110536248 | LOC106580495 | coding | upstream | 853223 | 65940106 ~ 66043855 (-) |
| LOC110536255 | LOC106580502 | coding | upstream | 1149665 | 66236548 ~ 66248437 (-) |
| erlin2 | erln2 | coding | upstream | 1165461 | 66252344 ~ 66279789 (-) |
| LOC110536257 | LOC106580503 | coding | upstream | 1209819 | 66296702 ~ 66300270 (-) |
| G1005824 | LOC106580466 | non-coding | downstream | 438609 | 64645913 ~ 64648075 (-) |
| G1005800 | zdhhc8 | non-coding | downstream | 469209 | 64615414 ~ 64617475 (-) |
| G1005665 | NA | non-coding | downstream | 606732 | 64403448 ~ 64479952 (-) |
| G1005628 | LOC106580457 | non-coding | downstream | 725661 | 64360764 ~ 64363777 (-) |
| G1005626 | NA | non-coding | downstream | 728239 | 64358051 ~ 64358445 (-) |
| G1006098 | NA | non-coding | upstream | 4312 | 65091195 ~ 65091537 (-) |
| G1006104 | NA | non-coding | upstream | 10592 | 65097475 ~ 65097992 (-) |
| G1006327 | NA | non-coding | upstream | 186419 | 65273302 ~ 65274706 (-) |
| G1006448 | NA | non-coding | upstream | 315141 | 65402024 ~ 65402481 (-) |
| G1006464 | NA | non-coding | upstream | 341722 | 65428605 ~ 65429036 (-) |
| G1004487 | NA | other | downstream | 1284682 | 63801529 ~ 63802002 (-) |
| LOC110536206 | LOC106580443 | other | downstream | 2340436 | 62740236 ~ 62804200 (-) |
| LOC110536201 | LOC106580439 | other | downstream | 2397362 | 62663428 ~ 62689389 (-) |
| LOC110536162 | NA | other | downstream | 3445253 | 61636026 ~ 61657316 (-) |
| G1006106 | NA | other | upstream | 12077 | 65098960 ~ 65099556 (-) |
| G1007506 | NA | other | upstream | 1285759 | 66372642 ~ 66372949 (-) |
| G1009720 | NA | other | upstream | 2884188 | 67971071 ~ 67971328 (-) |
| G1010443 | NA | other | upstream | 3600374 | 68687257 ~ 68687962 (-) |
| G1010922 | NA | other | upstream | 4029624 | 69116507 ~ 69119486 (-) |
