XLOC_028921 (CT025695.2)


Basic Information

Item Value
gene id XLOC_028921
gene name CT025695.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 34389152 ~ 34390120 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00055979
gtcaacaggcctccTAAGAGTTGTCGActggactggagtgacagaccaagaaggaagcgaagaatcagatgttgataaagggctgcaatgaactcctgaatgctcaagtgaagaaagcagtacatggtaccaagaatgattcccgtctcctccttaaagatctgactgctggaaggccagtttccccagtgaaaggatgaggtttggatcccaggagacatctggtgtgttttctccatcatactttcttctgctctgctggatctgaaagcggagaaagtgtgtgtacatctgtgtcagagtcttgggagattcctgcagtgtttcagcatgagccctgtgtttcagtttcagtatgttctggagaacagtggctgaaatccagcagaagactgggatgtggcacataataaagagactctttgactgtttaatgtgatcaatgatttctctggcctgattctgatctgtgagtctctttctgaagtactcctccttttgggcatcattgaatcctcgtatctctgtcagccggtcgatacagtcagcaggaatcttactggcagctgctggtctgctggtgatccagatgagagcagaaggaagcagatttcccttgatgaggttcgtcaggagaacatccagagaaactactgaagatacatcacgacacgtctcattaccagcaaagttcagaggaagacgacattcatccaatccatcaaggatgaacaggactttgaatcgtgtg

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000114938

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00055979 True 751 lncRNA 0.46 3 34389152 34390120

Neighbor

gene id symbol gene type direction distance location
XLOC_028920 CT025695.1 coding downstream 26731 34359175 ~ 34362421 (-)
XLOC_028919 CABZ01060112.1 coding downstream 420800 33968210 ~ 33968352 (-)
XLOC_028918 CABZ01060112.2 coding downstream 422084 33966917 ~ 33967068 (-)
XLOC_028917 NA coding downstream 427687 33959375 ~ 33961465 (-)
XLOC_028916 AL807749.2 coding downstream 580209 33796692 ~ 33808943 (-)
XLOC_028922 si:ch211-64i20.3 coding upstream 53530 34443650 ~ 34480611 (-)
XLOC_028923 NA coding upstream 96852 34486972 ~ 34494646 (-)
XLOC_028924 NA coding upstream 129384 34519504 ~ 34520936 (-)
XLOC_028925 AL645691.2 coding upstream 162947 34553067 ~ 34589087 (-)
XLOC_028926 si:ch211-237a4.2 coding upstream 363499 34753619 ~ 34776147 (-)
XLOC_028927 NA non-coding upstream 407673 34797793 ~ 34799395 (-)
XLOC_028928 NA non-coding upstream 457640 34847760 ~ 34857130 (-)

Expression


Co-expression Network