XLOC_028924


Basic Information

Item Value
gene id XLOC_028924
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 34519504 ~ 34520936 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00058258
CAACACATTAAAACTAACCTGAACTTATTGCAACACTCTTACTAAATAATGACTAATCCACGCAAACATAACagctatatataaaaaatcaaattaaacaGATGACTGCTACAAATCCATACCTCTACACACaggagaaaatgttttgctgcattcatgtcatgtgtgaaACGTTTTGTCCAAACTCTGTAGACACTAATCAGATCTTtacagtttctctccagtgtgaatctgcTTCTGTTTTCAGAagtgttaactgattaaacctctagtcacagtgtgaacacttgtacggtctcttcagtgtgaatcgtctggtgcagtttcaattttggagctgtaataaaagtcttcttacACGCAAAGTACATacactctttcacaccagtgtggatcttcatgtgtttattaagctTTGCTAACTGGTTGAAACTCTTCTCACATTGAGTGGATGTaaatggtctctctccagtgtgggtcttcatgtgtttattaaggtctgatgaGTTGCTGAAACTTatcccacaccgaagctgcggtcacactagaatttgagctttcgaaattctgttgtatggcgctGCGAAAAAGGGCGGGATTAAACGAGATGATTAagcattaaaaaagtgagcgattggtccatattttacatttctgtccagggAGGTCATGTTAAccatcttctattggtctcacaaAGTCAAGTAAAGCGATTTGGCAGGTCAGAGTTccccaagcttaaactttgcaacgcagtgaactgcgaaacttgatgcacAAACTTGCATTTCCCGTCTGATGCATTCACGTGTGTATGAATTGatgtctatggggagaaaagtccagtgtcaCCATGGCTTAAGTGCAAATGAATGGTTACTCTGAATGGTGTGgctcatcatgtgtttattaaggtgtgatgagcggctgaaacttttcccacactgagtgcatgtaaatggtttctctccagtgtgggtcttcatgtgtttattgagGTCTGATGAGTTGCTGAATCTCTTCCAACAcggagtgcatgtgaatggtttttctccagtgtgaaatctcatgtgtagattaaaggatgatgattggatgaaactcttcccacactgagtgcatgtgaacggtttctctccagtgtggattctcatgtgaatcttaagattgccatttcttcc

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00058258 True 1181 lncRNA 0.40 2 34519504 34520936

Neighbor

gene id symbol gene type direction distance location
XLOC_028923 NA coding downstream 24858 34486972 ~ 34494646 (-)
XLOC_028922 si:ch211-64i20.3 coding downstream 38893 34443650 ~ 34480611 (-)
XLOC_028921 CT025695.2 coding downstream 129384 34389152 ~ 34390120 (-)
XLOC_028920 CT025695.1 coding downstream 157083 34359175 ~ 34362421 (-)
XLOC_028919 CABZ01060112.1 coding downstream 551152 33968210 ~ 33968352 (-)
XLOC_028925 AL645691.2 coding upstream 32131 34553067 ~ 34589087 (-)
XLOC_028926 si:ch211-237a4.2 coding upstream 232683 34753619 ~ 34776147 (-)
XLOC_028927 NA coding upstream 276857 34797793 ~ 34799395 (-)
XLOC_028928 NA coding upstream 326824 34847760 ~ 34857130 (-)
XLOC_028929 NA coding upstream 531503 35052439 ~ 35053350 (-)
XLOC_028918 CABZ01060112.2 non-coding downstream 552436 33966917 ~ 33967068 (-)
XLOC_028930 NA non-coding upstream 539211 35060147 ~ 35083283 (-)

Expression


Co-expression Network