Gene
RNA
| Item | Value |
|---|---|
| gene id | G1007316 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 66199600 ~ 66208889 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| rho GTPase-activating protein 25-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1145956 | True | 1232 | lncRNA | 0.44 | 2 | 66199600 | 66208889 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536248 | LOC106580495 | coding | downstream | 155745 | 65940106 ~ 66043855 (-) |
| LOC100653466 | LOC106580488 | coding | downstream | 1085983 | 65104615 ~ 65113617 (-) |
| LOC110536236 | LOC106580470 | coding | downstream | 1496593 | 64672009 ~ 64703007 (-) |
| dgcr8 | LOC106580468 | coding | downstream | 1530686 | 64658998 ~ 64668914 (-) |
| LOC110536235 | LOC106580467 | coding | downstream | 1557445 | 64636219 ~ 64642155 (-) |
| LOC110536255 | LOC106580502 | coding | upstream | 27659 | 66236548 ~ 66248437 (-) |
| erlin2 | erln2 | coding | upstream | 43455 | 66252344 ~ 66279789 (-) |
| LOC110536257 | LOC106580503 | coding | upstream | 87813 | 66296702 ~ 66300270 (-) |
| LOC110536259 | LOC106580505 | coding | upstream | 291533 | 66500422 ~ 66510614 (-) |
| trnag-ccc-3 | NA | coding | upstream | 302842 | 66511731 ~ 66511801 (-) |
| G1007362 | NA | non-coding | downstream | 27660 | 66167369 ~ 66171940 (-) |
| G1007361 | NA | non-coding | downstream | 32742 | 66166649 ~ 66166858 (-) |
| G1007359 | NA | non-coding | downstream | 34786 | 66164584 ~ 66164814 (-) |
| G1007357 | NA | non-coding | downstream | 36386 | 66162990 ~ 66163214 (-) |
| G1007312 | NA | non-coding | downstream | 44776 | 66153147 ~ 66154824 (-) |
| G1007481 | NA | non-coding | upstream | 138898 | 66347787 ~ 66349129 (-) |
| G1007504 | NA | non-coding | upstream | 160236 | 66369125 ~ 66369353 (-) |
| G1007523 | NA | non-coding | upstream | 172869 | 66381758 ~ 66381990 (-) |
| G1007549 | NA | non-coding | upstream | 196564 | 66405453 ~ 66405663 (-) |
| G1006106 | NA | other | downstream | 1100044 | 65098960 ~ 65099556 (-) |
| G1005628 | LOC106580457 | other | downstream | 1835823 | 64360764 ~ 64363777 (-) |
| G1004487 | NA | other | downstream | 2397598 | 63801529 ~ 63802002 (-) |
| LOC110536206 | LOC106580443 | other | downstream | 3453352 | 62740236 ~ 62804200 (-) |
| LOC110536201 | LOC106580439 | other | downstream | 3510278 | 62663428 ~ 62689389 (-) |
| G1007506 | NA | other | upstream | 163753 | 66372642 ~ 66372949 (-) |
| G1009720 | NA | other | upstream | 1762182 | 67971071 ~ 67971328 (-) |
| G1010443 | NA | other | upstream | 2478368 | 68687257 ~ 68687962 (-) |
| G1010922 | NA | other | upstream | 2907618 | 69116507 ~ 69119486 (-) |
| G1011014 | NA | other | upstream | 3096447 | 69305336 ~ 69306428 (-) |
