G1007726


Basic Information

Item Value
gene id G1007726
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 66534132 ~ 66559203 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1146416
AATAAAATTGGTAAATGATAGATAAGCATACACCTTTAAAAACAATTTATAAAAGAAAATGCTGTTTGCtttttttgggagggggggggtaatCATCTTTCCTCCCATTATAGAGAAGAATTtagtaaaatacatgttttacatagtcaTTTTATAATCTTTGAAAACTATTATATCTTTCAAGACATTTGATCTGCATTGCTGTTAGTCTTTTGCAACTGGAATTGGTATTCTCTCACACAAAATGCACAACTAAAAAAAGTTACAATAAGTGCAGGAATTGGAACAAAAAAGTACTTAAATACCATGTCATCATGTTTTGGCCTTGTCTACAATAAAGAGAAATGTTTACACATAATAGTTCCAATCCCGTGAAGGTACATTTTTGTCAAAGCTGCCGGTTGAAGTCTAACCTTGATACTAAGTTACAGTATGGtgaaacaaaatacaaaataaggTTATTTGAAGTGAAATATTTGAAAAAAACTTTTTGGCTGGTAGtgaatgagggggaaaaaagccAACAGAATCAAACCGAGTGAACTTACACTGGAGCTATAGAATTTTTACATCAGAAACTACCAGTATGCTTTCATTTTGTATTTTCTGTGTAGCCTGGCTGTTTTATAACATGGCCAACCCAccaaactccagtgtagattccTATCTTTTTTGGAAAGAAGGATAGGAAATACCAGCTACGCATCTGCTCAGCATCTGCCTTGGAACAACAATTCCACTCACAATCACAGAGGTAGCTGACATGAAGAAAACGAAACATTTAAAATAGTTTTGTTGGCTGAAACACCATTCAGTGATTGTATTGTACAGTTGAAAATATACCAGACACAATGGCCCAACAGAAAATACTGGGTTAGTGATAATGTTATAGAGGCCTACCccctaaaaaaatatttttttaatttcaggAAATACATAGGCATATAAAGTTCTTTATACATTTGCGTAAAGAAATTTGCCAGTGAAGCCCCTGGGCAGTTAGGGCCCATTTCAATTGAAACCCCTTAAACATAGGCCCCAGGGACTTTAATTAATGCTATTAATTACTTGCATTTGATTTCTCTCTACGGAGACAATCATTGGCCTCAAGGTGGCGCTGGTTAATTACAGAAATAAGTTCTCTCCTGGTGACCCTCACCTGGGGCATATTTTTTTGTTAGTCAGTCAAAGTTGAGTTTTATTCTGAACCATTTCAACTCATTACACGTAGATGTTTGGCAATGAGAAATACATAAGGTTATATTGAAaggggaacctgatcctagagcagcactcctactcagactagaggtcgaccgattaattagggccgatttcaagttttcataacaattggtaatcggcatttttggacgccgattacattgcattccacgaggaaactgcgtggcaggctgaccacctgttacgcgagtacagcaaggagccaaggtaagttccTAGCTAGggttaaacttatcttataaaaaacaaccaatcttcacataatcactagttaactacacatggttgatgatattactaggagaactagcttgtcctgcgttgcatataatcaatgcggtgcgtgttaatttatcatcgaatcgcagcctactttgccaaacgggatgatttaacaaaagcacattcgtcaaaaaagcacaatcgttgcacgaaatgtacctaaccataaacatcaatgcctttcttaaaatcaatacacataagaatatatttttttaaacctgcatatttagttaagaaATTAATGTTAACTAGGGACATTGTGTCACTTCTCGTTCATTGCAGAGGGtcggggtatatgcaacagtttggaccGCCTGGCTCGTTGCTAACTAATTTGGTAGAATTTagcataattatgacataacattgaaggttgtgcaatggaacagcaatatttagacttgggGTTGCAAATACGGATCGGTTCTGTATTTTGCTGAAAGAATAagcgttttgttttcgaaatgatagtttctggatttgaccatattaaatgaccaacggctcgtatttctgtgtttattacattataattaagtctatgatttgatatagcagtctgactgagcggtggtaggctgcagcaggctcgtaagcattcattcaaacttgccagcagctcttagcaatgcttgcttcacagcgctgtatgacttcaagcctatcaactgcTGAGATTAAGCTGGCAATACTAGTatctattagaacatccaatagtcaaatgtatatgaaatacaaatggtatagagagaaatagtcgacgtgtcttaattcctataataactacaacctaaaacttcttaactggaaatattgaaccaccagctttctcatgttctgagcaaggaactttagcttttttttatttttttacatggcacatattgcacttttactttcttctcaaacacggtttttgcattatttaaaccaaatttagcatgtttcattatttatttgagactaaatagattttatgtaTTATATGAAGATAAAATagaagtgttcattgttcattcagtattgttgtaaagtatttagtcagccaccaattgtgcaagttctcccacttaaaaagatgaggcctgtaatttatatcataggtacacttcaactatgacagacaaaattagaagaaagaaaatccagaaaatcacattgtaggatttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1146416 True 2700 lncRNA 0.36 2 66534132 66559203

Neighbor

gene id symbol gene type direction distance location
LOC110536260 LOC106580506 coding downstream 10036 66511861 ~ 66524096 (-)
trnag-ccc-3 NA coding downstream 22331 66511731 ~ 66511801 (-)
LOC110536259 LOC106580505 coding downstream 23518 66500422 ~ 66510614 (-)
LOC110536257 LOC106580503 coding downstream 233862 66296702 ~ 66300270 (-)
erlin2 erln2 coding downstream 254343 66252344 ~ 66279789 (-)
rnf181 rnf181 coding upstream 6095 66565298 ~ 66572050 (-)
LOC110536263 LOC106580509 coding upstream 14173 66573376 ~ 66579635 (-)
LOC110536264 LOC106580511 coding upstream 32469 66591672 ~ 66596295 (-)
LOC110536265 LOC106580510 coding upstream 38266 66597469 ~ 66625841 (-)
LOC110536266 LOC106580554 coding upstream 170027 66729230 ~ 66765764 (-)
G1007720 NA non-coding downstream 4769 66528837 ~ 66529363 (-)
G1007706 NA non-coding downstream 34956 66498892 ~ 66499176 (-)
G1007693 NA non-coding downstream 56025 66477840 ~ 66478107 (-)
G1007692 NA non-coding downstream 57911 66475713 ~ 66476221 (-)
G1007689 NA non-coding downstream 62858 66471042 ~ 66471274 (-)
G1007776 NA non-coding upstream 77153 66636356 ~ 66636850 (-)
G1007779 NA non-coding upstream 79543 66638746 ~ 66638960 (-)
G1007841 NA non-coding upstream 129088 66688291 ~ 66688885 (-)
G1007855 NA non-coding upstream 138393 66697596 ~ 66697901 (-)
G1007506 NA other downstream 161183 66372642 ~ 66372949 (-)
G1006106 NA other downstream 1434576 65098960 ~ 65099556 (-)
G1005628 LOC106580457 other downstream 2170355 64360764 ~ 64363777 (-)
G1004487 NA other downstream 2732130 63801529 ~ 63802002 (-)
LOC110536206 LOC106580443 other downstream 3787884 62740236 ~ 62804200 (-)
G1009720 NA other upstream 1411868 67971071 ~ 67971328 (-)
G1010443 NA other upstream 2128054 68687257 ~ 68687962 (-)
G1010922 NA other upstream 2557304 69116507 ~ 69119486 (-)
G1011014 NA other upstream 2746133 69305336 ~ 69306428 (-)
G1012814 NA other upstream 4325273 70884476 ~ 70890991 (-)

Expression


Co-expression Network