XLOC_028930


Basic Information

Item Value
gene id XLOC_028930
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 35060147 ~ 35083283 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00057375
tagaaaaaatattagcaTACCTgtggtagcaaaaaaaaaaaaaaaaatatatatatatatatatatatatatatattttttttttttttttaaataagtactttttcaAGATAATACCTCAGACTCGTTGTttagaaaaagtacaaattttagcTTACACTTAAAATCGAAACAAAGTATTTACTATTAGTGTTTATTATGTATCATTATCTGAAGACAAGATgttaaaatgtagctttaaaaaCTGTGACCCTGACCATGACCTGACCATGTAATTTAATCCAATCACAGAAACTCAAACCGACCAATCAGCAAGTGTCTGCTACCCCCCACTGTGCAAGAGGTGTGAAAAGAAGCAGGTCTCTAGCAACACCTcaactttttttttattgctttttgttcttttctctcctatgtttgaactttgaactgaactttgaacaccttgaacacttgaaacactgaaattgtca

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00057375 True 473 lncRNA 0.30 2 35060147 35083283

Neighbor

gene id symbol gene type direction distance location
XLOC_028929 NA coding downstream 6797 35052439 ~ 35053350 (-)
XLOC_028928 NA coding downstream 203017 34847760 ~ 34857130 (-)
XLOC_028927 NA coding downstream 260752 34797793 ~ 34799395 (-)
XLOC_028926 si:ch211-237a4.2 coding downstream 284000 34753619 ~ 34776147 (-)
XLOC_028925 AL645691.2 coding downstream 471060 34553067 ~ 34589087 (-)
XLOC_028931 BX000703.1 coding upstream 150014 35233297 ~ 35233413 (-)
XLOC_028932 NA coding upstream 407694 35490977 ~ 35493425 (-)
XLOC_028933 NA coding upstream 608512 35691795 ~ 35692409 (-)
XLOC_028934 CABZ01087265.1 coding upstream 651723 35735006 ~ 35735169 (-)
XLOC_028935 NA coding upstream 726170 35809453 ~ 35811238 (-)
XLOC_028924 NA non-coding downstream 539211 34519504 ~ 34520936 (-)

Expression


Co-expression Network