Gene
RNA
| Item | Value |
|---|---|
| gene id | G1008432 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 66882977 ~ 66883447 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: hephaestin-like protein 1, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1147188 | True | 471 | lncRNA | 0.45 | 1 | 66882977 | 66883447 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536269 | NA | coding | downstream | 8195 | 66872269 ~ 66874782 (-) |
| LOC110536266 | LOC106580554 | coding | downstream | 117213 | 66729230 ~ 66765764 (-) |
| LOC110536265 | LOC106580510 | coding | downstream | 257136 | 66597469 ~ 66625841 (-) |
| LOC110536264 | LOC106580511 | coding | downstream | 286682 | 66591672 ~ 66596295 (-) |
| LOC110536263 | LOC106580509 | coding | downstream | 303342 | 66573376 ~ 66579635 (-) |
| LOC110536273 | LOC106580518 | coding | upstream | 108729 | 66992176 ~ 67012775 (-) |
| LOC110535096 | zmat4 | coding | upstream | 273583 | 67157030 ~ 67344175 (-) |
| LOC110536277 | sfrp1 | coding | upstream | 504289 | 67387736 ~ 67421927 (-) |
| LOC110536278 | LOC106580522 | coding | upstream | 598380 | 67481827 ~ 67534356 (-) |
| LOC110536279 | LOC106580523 | coding | upstream | 652228 | 67535675 ~ 67552685 (-) |
| G1008426 | NA | non-coding | downstream | 11430 | 66870570 ~ 66871547 (-) |
| G1007918 | NA | non-coding | downstream | 153995 | 66727698 ~ 66728982 (-) |
| G1007916 | NA | non-coding | downstream | 158725 | 66720929 ~ 66724252 (-) |
| G1007883 | NA | non-coding | downstream | 163752 | 66718926 ~ 66719225 (-) |
| G1008433 | NA | non-coding | upstream | 379 | 66883826 ~ 66884133 (-) |
| G1008456 | vp37b | non-coding | upstream | 32653 | 66916100 ~ 66936064 (-) |
| G1008470 | NA | non-coding | upstream | 63043 | 66946490 ~ 66947153 (-) |
| G1008489 | LOC108255714 | non-coding | upstream | 91050 | 66974497 ~ 66975081 (-) |
| G1008507 | NA | non-coding | upstream | 142764 | 67026211 ~ 67026450 (-) |
| G1007506 | NA | other | downstream | 510028 | 66372642 ~ 66372949 (-) |
| G1006106 | NA | other | downstream | 1783421 | 65098960 ~ 65099556 (-) |
| G1005628 | LOC106580457 | other | downstream | 2519200 | 64360764 ~ 64363777 (-) |
| G1004487 | NA | other | downstream | 3080975 | 63801529 ~ 63802002 (-) |
| LOC110536206 | LOC106580443 | other | downstream | 4136729 | 62740236 ~ 62804200 (-) |
| G1009720 | NA | other | upstream | 1087624 | 67971071 ~ 67971328 (-) |
| G1010443 | NA | other | upstream | 1803810 | 68687257 ~ 68687962 (-) |
| G1010922 | NA | other | upstream | 2233060 | 69116507 ~ 69119486 (-) |
| G1011014 | NA | other | upstream | 2421889 | 69305336 ~ 69306428 (-) |
| G1012814 | NA | other | upstream | 4001029 | 70884476 ~ 70890991 (-) |
