G1008433



Basic Information


Item Value
gene id G1008433
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 66883826 ~ 66884133 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1147189
GTACGAATGTGATATGAACATTCAGTGTCAGCTGGCTGGATGACGACTGCTGGCTTCCAGGGTCCATGCTCCTGGATTCTAACTGACTCTCTGTCAATCAGTGATGGCAGTGGTCTAGCTGATCTGTCGTAGTAtcgcttttgttgttgttgtctctgtgcaCGTTTTCCATGCATTTCCTTGTAGCTGACGACCTCAGGTTGCAGCTGCTGGTTGGTGCTGGGAAGGATTGAGCGAAGTCTGCGGCTCATCAACAGCTGGGGTGGAGATTTGAAGTTGTCAACTGGAGTGTTGCGGTATTCAAGGAG

Function


NR:

description
PREDICTED: uncharacterized protein K02A2.6-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1147189 True 308 lncRNA 0.50 1 66883826 66884133

Neighbor


gene id symbol gene type direction distance location
LOC110536269 NA coding downstream 9044 66872269 ~ 66874782 (-)
LOC110536266 LOC106580554 coding downstream 118062 66729230 ~ 66765764 (-)
LOC110536265 LOC106580510 coding downstream 257985 66597469 ~ 66625841 (-)
LOC110536264 LOC106580511 coding downstream 287531 66591672 ~ 66596295 (-)
LOC110536263 LOC106580509 coding downstream 304191 66573376 ~ 66579635 (-)
LOC110536273 LOC106580518 coding upstream 108043 66992176 ~ 67012775 (-)
LOC110535096 zmat4 coding upstream 272897 67157030 ~ 67344175 (-)
LOC110536277 sfrp1 coding upstream 503603 67387736 ~ 67421927 (-)
LOC110536278 LOC106580522 coding upstream 597694 67481827 ~ 67534356 (-)
LOC110536279 LOC106580523 coding upstream 651542 67535675 ~ 67552685 (-)
G1008432 NA non-coding downstream 379 66882977 ~ 66883447 (-)
G1008426 NA non-coding downstream 12279 66870570 ~ 66871547 (-)
G1007918 NA non-coding downstream 154844 66727698 ~ 66728982 (-)
G1007916 NA non-coding downstream 159574 66720929 ~ 66724252 (-)
G1008456 vp37b non-coding upstream 31967 66916100 ~ 66936064 (-)
G1008470 NA non-coding upstream 62357 66946490 ~ 66947153 (-)
G1008489 LOC108255714 non-coding upstream 90364 66974497 ~ 66975081 (-)
G1008507 NA non-coding upstream 142078 67026211 ~ 67026450 (-)
G1008508 NA non-coding upstream 142559 67026692 ~ 67027059 (-)
G1007506 NA other downstream 510877 66372642 ~ 66372949 (-)
G1006106 NA other downstream 1784270 65098960 ~ 65099556 (-)
G1005628 LOC106580457 other downstream 2520049 64360764 ~ 64363777 (-)
G1004487 NA other downstream 3081824 63801529 ~ 63802002 (-)
LOC110536206 LOC106580443 other downstream 4137578 62740236 ~ 62804200 (-)
G1009720 NA other upstream 1086938 67971071 ~ 67971328 (-)
G1010443 NA other upstream 1803124 68687257 ~ 68687962 (-)
G1010922 NA other upstream 2232374 69116507 ~ 69119486 (-)
G1011014 NA other upstream 2421203 69305336 ~ 69306428 (-)
G1012814 NA other upstream 4000343 70884476 ~ 70890991 (-)

Expression



Co-expression Network