G1008470


Basic Information

Item Value
gene id G1008470
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 66946490 ~ 66947153 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1147227
TTTTACGAGCCGCTCAGTTGTAGATTGTTTTTCTTCCGACAATACTGATTTaattagctacagtagttagctagctatgctcGATTGCTaacgagctagctagctagtccgTGTCAAAATGTCACAAACTGAAGTGGACCATCAAACCCGGGACTGCTTGTTCCGCGTATCAAAATTATTTAATATTTTGTAGAAAATCCGATTTTCCACTTTAAGAGTTTAAGAGCTAACTAACtgttagctggctaactaacGTTAAATGTCTATCAGATTGACAAATCACTAGCTATCAAGCCATTTGAATGCTAACGTTATTCAGACATCTCATCAAATGGCTTGGATTACTTAGATTAGCTACTCATTCATAAAATCTATCGCCTTCAAACCTGCGTTTCCTCGTGGTTATTGAACCCTGTCCCAGGTATAACTAGCGTTCTGATCATAACCCAACGGATTAAACTCTAGCTAATCTGACAGCCCACACAGACAGGGCGCGTTCGAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1147227 True 504 lncRNA 0.40 2 66946490 66947153

Neighbor

gene id symbol gene type direction distance location
LOC110536269 NA coding downstream 71708 66872269 ~ 66874782 (-)
LOC110536266 LOC106580554 coding downstream 180726 66729230 ~ 66765764 (-)
LOC110536265 LOC106580510 coding downstream 320649 66597469 ~ 66625841 (-)
LOC110536264 LOC106580511 coding downstream 350195 66591672 ~ 66596295 (-)
LOC110536263 LOC106580509 coding downstream 366855 66573376 ~ 66579635 (-)
LOC110536273 LOC106580518 coding upstream 45023 66992176 ~ 67012775 (-)
LOC110535096 zmat4 coding upstream 209877 67157030 ~ 67344175 (-)
LOC110536277 sfrp1 coding upstream 440583 67387736 ~ 67421927 (-)
LOC110536278 LOC106580522 coding upstream 534674 67481827 ~ 67534356 (-)
LOC110536279 LOC106580523 coding upstream 588522 67535675 ~ 67552685 (-)
G1008456 vp37b non-coding downstream 10426 66916100 ~ 66936064 (-)
G1008433 NA non-coding downstream 62357 66883826 ~ 66884133 (-)
G1008432 NA non-coding downstream 63043 66882977 ~ 66883447 (-)
G1008426 NA non-coding downstream 74943 66870570 ~ 66871547 (-)
G1008489 LOC108255714 non-coding upstream 27344 66974497 ~ 66975081 (-)
G1008507 NA non-coding upstream 79058 67026211 ~ 67026450 (-)
G1008508 NA non-coding upstream 79539 67026692 ~ 67027059 (-)
G1008509 NA non-coding upstream 80424 67027577 ~ 67027788 (-)
G1008640 NA non-coding upstream 243201 67190354 ~ 67191520 (-)
G1007506 NA other downstream 573541 66372642 ~ 66372949 (-)
G1006106 NA other downstream 1846934 65098960 ~ 65099556 (-)
G1005628 LOC106580457 other downstream 2582713 64360764 ~ 64363777 (-)
G1004487 NA other downstream 3144488 63801529 ~ 63802002 (-)
LOC110536206 LOC106580443 other downstream 4200242 62740236 ~ 62804200 (-)
G1009720 NA other upstream 1023918 67971071 ~ 67971328 (-)
G1010443 NA other upstream 1740104 68687257 ~ 68687962 (-)
G1010922 NA other upstream 2169354 69116507 ~ 69119486 (-)
G1011014 NA other upstream 2358183 69305336 ~ 69306428 (-)
G1012814 NA other upstream 3937323 70884476 ~ 70890991 (-)

Expression


Co-expression Network