G1008729


Basic Information

Item Value
gene id G1008729
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 67322020 ~ 67411188 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1147503
ATGAGTATAAACTTGCTTTACTAGCATAGGGATGAATGAGCATAAACATGCTTTACTAGCATAGTAATGAATGAGTATAAACTTGCTTTACTAGCCTAGCGATGAACGAGCATAAACATGCTTTACTAGCATAGTAATGAATGAGTATAAACTTGCTTTACTAGCATAGTGATGAATGAGCATAAACATGCTTTACTAGCATAGTAATGAATGAGTATAAACACGCTTTACTAGCCTAGCGATGAACGAGCATAAACATGCTTTACTAGCCTAGCGATGAACGAGCATAAACATGCTTTACTAGCATAGTGATGAATGAGTATAAACTTGCTTTACTAGCATAGTGATGAACGAGCATAAACACGCTTTACTAGCATAGTAATGAATGAGTATAAACTTGCTTTACTAGCATAGTAATGAATGAGTATAAACTTGCTTTACTAGCATAGTGATGAATGAGCATAAACATGCTTTACTAGCATAGTAATGAATGAGTATAAACTTGCTTTACTAGCATAGTGATGAATGAGCATAAACACGCTTTACTAGCATAGTAATGAATGAGTATGAACTTGCTTTACTAGCATAGTGATGAATGAGCATAAACATGCTTTACTAGCATAGTGATGAATGAGTATAAACTTGCTTTACTAGCCTAGCGATGAACGAGCGTAAACATGCTTTACGTTTCAAAGGTCCAAGCATATTTTCAGCAAAGAATAGTTTCATTTTAAAGAAGATTTGCTCAATTTCATGCTTGTTGGATGGATGGGACATTGttgtttttaaaaaactttaaTTATCGTAGAAATTATGTGGCTTTGACCAACATTTCACAGAGCCTACTCTCAGACAGTGCTCAGGGTAGTTGTTCTGTCtgagtattttatttatttcacctttatttaaccaggtaggcaagttgagaacaagttctcatttacaattgcgacctggccaagataaagcaaagcagttcgacagatacaacgacacagagttacacatggagtaaaacaaacatacagtcaataatacagaataaaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1147503 True 1048 lncRNA 0.35 3 67322020 67411188

Neighbor

gene id symbol gene type direction distance location
LOC110536273 LOC106580518 coding downstream 309245 66992176 ~ 67012775 (-)
LOC110536269 NA coding downstream 447238 66872269 ~ 66874782 (-)
LOC110536266 LOC106580554 coding downstream 556256 66729230 ~ 66765764 (-)
LOC110536265 LOC106580510 coding downstream 696179 66597469 ~ 66625841 (-)
LOC110536264 LOC106580511 coding downstream 725725 66591672 ~ 66596295 (-)
LOC110536278 LOC106580522 coding upstream 70639 67481827 ~ 67534356 (-)
LOC110536279 LOC106580523 coding upstream 124487 67535675 ~ 67552685 (-)
LOC110536280 LOC106580524 coding upstream 148246 67559434 ~ 67574486 (-)
LOC110536281 LOC106580525 coding upstream 170435 67581623 ~ 67800037 (-)
LOC118937377 tm2d2 coding upstream 591010 68002198 ~ 68005661 (-)
G1008640 NA non-coding downstream 130500 67190354 ~ 67191520 (-)
G1008509 NA non-coding downstream 294232 67027577 ~ 67027788 (-)
G1008508 NA non-coding downstream 294961 67026692 ~ 67027059 (-)
G1008507 NA non-coding downstream 295570 67026211 ~ 67026450 (-)
G1008489 LOC108255714 non-coding downstream 346939 66974497 ~ 66975081 (-)
G1008808 NA non-coding upstream 50426 67461614 ~ 67461818 (-)
G1008816 NA non-coding upstream 55625 67466813 ~ 67467056 (-)
G1008827 NA non-coding upstream 61437 67472625 ~ 67472866 (-)
G1009382 NA non-coding upstream 67027 67478215 ~ 67478353 (-)
G1009413 NA non-coding upstream 129539 67540727 ~ 67542731 (-)
G1007506 NA other downstream 949071 66372642 ~ 66372949 (-)
G1006106 NA other downstream 2222464 65098960 ~ 65099556 (-)
G1005628 LOC106580457 other downstream 2958243 64360764 ~ 64363777 (-)
G1004487 NA other downstream 3520018 63801529 ~ 63802002 (-)
LOC110536206 LOC106580443 other downstream 4575772 62740236 ~ 62804200 (-)
G1009720 NA other upstream 559883 67971071 ~ 67971328 (-)
G1010443 NA other upstream 1276069 68687257 ~ 68687962 (-)
G1010922 NA other upstream 1705319 69116507 ~ 69119486 (-)
G1011014 NA other upstream 1894148 69305336 ~ 69306428 (-)
G1012814 NA other upstream 3473288 70884476 ~ 70890991 (-)

Expression


Co-expression Network