Gene
RNA
| Item | Value |
|---|---|
| gene id | G1008742 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 67338550 ~ 67339089 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1147517 | True | 216 | lncRNA | 0.37 | 2 | 67338550 | 67339089 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536273 | LOC106580518 | coding | downstream | 325775 | 66992176 ~ 67012775 (-) |
| LOC110536269 | NA | coding | downstream | 463768 | 66872269 ~ 66874782 (-) |
| LOC110536266 | LOC106580554 | coding | downstream | 572786 | 66729230 ~ 66765764 (-) |
| LOC110536265 | LOC106580510 | coding | downstream | 712709 | 66597469 ~ 66625841 (-) |
| LOC110536264 | LOC106580511 | coding | downstream | 742255 | 66591672 ~ 66596295 (-) |
| LOC110536277 | sfrp1 | coding | upstream | 48647 | 67387736 ~ 67421927 (-) |
| LOC110536278 | LOC106580522 | coding | upstream | 142738 | 67481827 ~ 67534356 (-) |
| LOC110536279 | LOC106580523 | coding | upstream | 196586 | 67535675 ~ 67552685 (-) |
| LOC110536280 | LOC106580524 | coding | upstream | 220345 | 67559434 ~ 67574486 (-) |
| LOC110536281 | LOC106580525 | coding | upstream | 242534 | 67581623 ~ 67800037 (-) |
| G1008640 | NA | non-coding | downstream | 147030 | 67190354 ~ 67191520 (-) |
| G1008509 | NA | non-coding | downstream | 310762 | 67027577 ~ 67027788 (-) |
| G1008508 | NA | non-coding | downstream | 311491 | 67026692 ~ 67027059 (-) |
| G1008507 | NA | non-coding | downstream | 312100 | 67026211 ~ 67026450 (-) |
| G1008489 | LOC108255714 | non-coding | downstream | 363469 | 66974497 ~ 66975081 (-) |
| G1008808 | NA | non-coding | upstream | 122525 | 67461614 ~ 67461818 (-) |
| G1008816 | NA | non-coding | upstream | 127724 | 67466813 ~ 67467056 (-) |
| G1008827 | NA | non-coding | upstream | 133536 | 67472625 ~ 67472866 (-) |
| G1009382 | NA | non-coding | upstream | 139126 | 67478215 ~ 67478353 (-) |
| G1009413 | NA | non-coding | upstream | 201638 | 67540727 ~ 67542731 (-) |
| G1007506 | NA | other | downstream | 965601 | 66372642 ~ 66372949 (-) |
| G1006106 | NA | other | downstream | 2238994 | 65098960 ~ 65099556 (-) |
| G1005628 | LOC106580457 | other | downstream | 2974773 | 64360764 ~ 64363777 (-) |
| G1004487 | NA | other | downstream | 3536548 | 63801529 ~ 63802002 (-) |
| LOC110536206 | LOC106580443 | other | downstream | 4592302 | 62740236 ~ 62804200 (-) |
| G1009720 | NA | other | upstream | 631982 | 67971071 ~ 67971328 (-) |
| G1010443 | NA | other | upstream | 1348168 | 68687257 ~ 68687962 (-) |
| G1010922 | NA | other | upstream | 1777418 | 69116507 ~ 69119486 (-) |
| G1011014 | NA | other | upstream | 1966247 | 69305336 ~ 69306428 (-) |
| G1012814 | NA | other | upstream | 3545387 | 70884476 ~ 70890991 (-) |
