XLOC_028938 (si:dkey-176f19.1)


Basic Information

Item Value
gene id XLOC_028938
gene name si:dkey-176f19.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 36016763 ~ 36017577 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00056002
acctaattgaagagaatgaggagaataaagaggaggaacatagtgtcaaaattgaggaaaaaactcatttacacactgatggtattttgaaaaggagagacacctgcactcagtgtggaaaatgtttcagccgatcatcatcccttaataaacacatgaggatccacactggagggaaaccatatacttgcactcagtgtgggaagacttTTAACAGCTCATCACtacttaatcaacacatgaggatccacactggagagaaaccattcacatgcactcagtgtggaaagagttttggaagaaaaggcaatcttaagattcacatgaagatccacactggagagaaaccattcacatgctgtcagtgtgggaagagttttaactgcttatcacactttaatctacacatgaggatccacactggagagacaccattcacatgcactcagtgtgggaagagtttcagccaatcatcatcccttaatcaacacatgaggatccacaccggaaataaaccattcacatgcactcagtgtgggaaaagttttaaaaGCTCATCACACCTTattcgacacatgaggatccacactggagagaaaccattcacatgcactcaatgtgggaagagtttcaaccaatcatcacaacttaatcaacacatgatgatccacactggagagaaaccatttacatgcactcagtgtgggaagagtttcactcgatcatcatcccttaatctacacatatTAACCCACACTAGAGAGAAATCATTCATTTGTACTTAAGCAAGAGAATAGTCCCGTTTTCCCCATGCA

Function

symbol description
si:dkey-176f19.1 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription, DNA-templated.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000101463

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00056002 True 815 mRNA 0.41 1 36016763 36017577

Neighbor

gene id symbol gene type direction distance location
XLOC_028936 zgc:174653 coding downstream 27018 35851089 ~ 35989745 (-)
XLOC_028935 NA coding downstream 205525 35809453 ~ 35811238 (-)
XLOC_028934 CABZ01087265.1 coding downstream 281594 35735006 ~ 35735169 (-)
XLOC_028933 NA coding downstream 324354 35691795 ~ 35692409 (-)
XLOC_028932 NA coding downstream 523338 35490977 ~ 35493425 (-)
XLOC_028939 znf1109 coding upstream 114535 36132112 ~ 36144500 (-)
XLOC_028940 si:dkey-238o14.1 coding upstream 456204 36473781 ~ 36484943 (-)
XLOC_028941 NA coding upstream 477381 36494958 ~ 36496294 (-)
XLOC_028942 BX649453.1 coding upstream 488862 36506439 ~ 36522557 (-)
XLOC_028943 NA coding upstream 563626 36581203 ~ 36583368 (-)
XLOC_028931 BX000703.1 non-coding downstream 783350 35233297 ~ 35233413 (-)
XLOC_028944 NA non-coding upstream 567742 36585319 ~ 36585639 (-)
XLOC_028945 NA non-coding upstream 746563 36764140 ~ 37172305 (-)
XLOC_028950 NA non-coding upstream 1249633 37267210 ~ 37271230 (-)

Expression


Co-expression Network