G1009090


Basic Information

Item Value
gene id G1009090
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 67863923 ~ 67915471 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1147892
gtataagaGACAGAttttctataagattgaggtcagagctttgtgatggccactccaataccttgactttgttgtccttaagacattttgccacaactttggatgtatgcttggcgtcattgtccatttggaagacacatttgtgaccaaactttaacttcctgactgatgtcttgagatgttgcgtcaatatatccacctaattttcctacctcatgatgccatctattttgtgaagtgcaccagtccctcctgcagcaaagcaccctcacaacatgatgctgccacccccgtgcttcacggttgggatggtattcttcggcttgcaagcctccccctttttcctccaaacataaagatggtcattat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1147892 True 369 lncRNA 0.44 2 67863923 67915471

Neighbor

gene id symbol gene type direction distance location
LOC110535097 LOC106580544 coding upstream 391144 67453635 ~ 67472779 (+)
LOC110536274 LOC106580519 coding upstream 816396 67046528 ~ 67047527 (+)
LOC110536272 LOC106580517 coding upstream 873524 66946456 ~ 66990399 (+)
LOC110536271 vp37b coding upstream 919817 66915989 ~ 66944106 (+)
LOC110536270 LOC106580516 coding upstream 947984 66896753 ~ 66915939 (+)
LOC110536283 LOC106580527 coding downstream 125582 68041053 ~ 68047964 (+)
LOC110536285 LOC106580528 coding downstream 148677 68064148 ~ 68073099 (+)
LOC118937378 NA coding downstream 183654 68099125 ~ 68101800 (+)
LOC110536289 LOC106580533 coding downstream 371587 68287058 ~ 68361204 (+)
LOC110535098 LOC106580534 coding downstream 449009 68364480 ~ 68413213 (+)
G1009068 NA non-coding upstream 25110 67838521 ~ 67838813 (+)
G1009064 NA non-coding upstream 30419 67833274 ~ 67833504 (+)
G1009056 NA non-coding upstream 38782 67824775 ~ 67825141 (+)
G1009014 NA non-coding upstream 91839 67771839 ~ 67772084 (+)
G1009012 NA non-coding upstream 97222 67766365 ~ 67766701 (+)
G1009165 NA non-coding downstream 49053 67964524 ~ 67964727 (+)
G1009167 NA non-coding downstream 52563 67968034 ~ 67968268 (+)
G1009168 NA non-coding downstream 56294 67971765 ~ 67972015 (+)
G1009170 NA non-coding downstream 59482 67974953 ~ 67975308 (+)
G1009186 NA non-coding downstream 86739 68002210 ~ 68080438 (+)
G1008017 NA other upstream 981672 66881799 ~ 66882251 (+)
LOC110536267 LOC106580513 other upstream 1065706 66774135 ~ 66798230 (+)
G1007556 NA other upstream 1450988 66412574 ~ 66412935 (+)
G1007088 NA other upstream 1846350 66009581 ~ 66017573 (+)
G1007008 NA other upstream 1964555 65898748 ~ 65899368 (+)
LOC110536291 LOC106580540 other downstream 669197 68584627 ~ 68587134 (+)
LOC110535101 LOC106580561 other downstream 884729 68687221 ~ 68847333 (+)
LOC110536300 LOC106580593 other downstream 1483247 69398535 ~ 69400234 (+)
G1011336 NA other downstream 1718030 69633501 ~ 69633876 (+)
sb:cb288 NA other downstream 1789963 69705334 ~ 69711411 (+)

Expression


Co-expression Network