G1009167


Basic Information

Item Value
gene id G1009167
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 67968034 ~ 67968268 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1147971
gaaaacagccctatctggtgtaacaaacacaaagacaggaacaatcacccacaaaacccaacacaaaacaggctacctaaatatggctcccaatcagagacaatgactaacacctgcctctgattgagaaccatatcaggcccaaacacagaaacagacaaactagacatccaacatagaatgcccactcagatcacaccctgaccaaacaaaacatagaacatacaaagcaaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1147971 True 235 lncRNA 0.43 1 67968034 67968268

Neighbor

gene id symbol gene type direction distance location
LOC110535097 LOC106580544 coding upstream 495255 67453635 ~ 67472779 (+)
LOC110536274 LOC106580519 coding upstream 920507 67046528 ~ 67047527 (+)
LOC110536272 LOC106580517 coding upstream 977635 66946456 ~ 66990399 (+)
LOC110536271 vp37b coding upstream 1023928 66915989 ~ 66944106 (+)
LOC110536270 LOC106580516 coding upstream 1052095 66896753 ~ 66915939 (+)
LOC110536283 LOC106580527 coding downstream 72785 68041053 ~ 68047964 (+)
LOC110536285 LOC106580528 coding downstream 95880 68064148 ~ 68073099 (+)
LOC118937378 NA coding downstream 130857 68099125 ~ 68101800 (+)
LOC110536289 LOC106580533 coding downstream 318790 68287058 ~ 68361204 (+)
LOC110535098 LOC106580534 coding downstream 396212 68364480 ~ 68413213 (+)
G1009165 NA non-coding upstream 3307 67964524 ~ 67964727 (+)
G1009090 NA non-coding upstream 52563 67863923 ~ 67915471 (+)
G1009068 NA non-coding upstream 129221 67838521 ~ 67838813 (+)
G1009064 NA non-coding upstream 134530 67833274 ~ 67833504 (+)
G1009056 NA non-coding upstream 142893 67824775 ~ 67825141 (+)
G1009168 NA non-coding downstream 3497 67971765 ~ 67972015 (+)
G1009170 NA non-coding downstream 6685 67974953 ~ 67975308 (+)
G1009186 NA non-coding downstream 33942 68002210 ~ 68080438 (+)
G1009202 NA non-coding downstream 63472 68031740 ~ 68035487 (+)
G1009233 NA non-coding downstream 120481 68088749 ~ 68091504 (+)
G1008017 NA other upstream 1085783 66881799 ~ 66882251 (+)
LOC110536267 LOC106580513 other upstream 1169817 66774135 ~ 66798230 (+)
G1007556 NA other upstream 1555099 66412574 ~ 66412935 (+)
G1007088 NA other upstream 1950461 66009581 ~ 66017573 (+)
G1007008 NA other upstream 2068666 65898748 ~ 65899368 (+)
LOC110536291 LOC106580540 other downstream 616400 68584627 ~ 68587134 (+)
LOC110535101 LOC106580561 other downstream 831932 68687221 ~ 68847333 (+)
LOC110536300 LOC106580593 other downstream 1430450 69398535 ~ 69400234 (+)
G1011336 NA other downstream 1665233 69633501 ~ 69633876 (+)
sb:cb288 NA other downstream 1737166 69705334 ~ 69711411 (+)

Expression


Co-expression Network