G1009186


Basic Information

Item Value
gene id G1009186
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 68002210 ~ 68080438 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1147992
ACCTTGAGAAACATTTTATTGAACCACAAATACTTGATAGCACACACACAGTTTGCATTCCTTCTTCTGTTTTTCTCAACCTGTCATTTTACAAGACACATACCATAAAATGAACCGGTAGACTTTTGACCATATTTACAGAAGACTGTCATTTCACATTTTTCCTATATTGAAAGGACATAGGGGAAATAAAGTTAAACATTTGAATGcataacaaaataataaaaaacaatcaCAGAATTGAGGGTACATACAGCATTACTCAATCTAATTGTTTTCATTTGGAACACTAAATCAGAAGTACATTTGGAGTAATCTCTATAACCCTGCAACCAGTACGGGTACAAAAGCTCAAAGTTGAGGCCAAAATAACAATATGTATACAGGTACTATGTACATATAATGTCAAATGTGAAATTTGGGCTTTAGTTAAGTGGGGTAAATTATTAGGAATCAAGAGTGAAATTCAATCCTATAACGCAACAATGGTTTGATGAGACTTGGAAAAGACCACAGTATGAAAACTTATGTGACAAACACTGAATAGCTCAAATGGTTGACTTATACGCCATTACAAAGCTTCAGTGATTGGATAGAACACAAATATTTAGactcctcatcagatggtcagacATGGTAATGCCTCAGATGTTGTGCAGTTGGTGCACGTATAAATCGCATGATGAAACTTATAGCCTAGATTTAAGCTTTCATATAGATATCATAGCAACAACCCATTTTCTTTGCTTCAACAGTTCAGTGCTCTAACCTTTACAACAAAATAAAACCTACACCAGCCACATGTCAACCACGCCCCTGGTCCACATCACACATCTTTCACAACTACTCCTGTAGTTATCCTACGATGAGAGACGAAAGACTGATGAAATACTAAAGCTGGATTTAAACTGCGGAAACAGCAGACAAGCGAATAATTGCTATCTATGGCGTGCACAAGCATAAAGTGATACCCCGTCAGGTGACATTATTCTCTAGGAGAATCTGAGATAAAGGCCTCTGACACGTGCTCAGACTGCTCTGACCTGTAATTCACATATAAGCGATGATACTTAGTTGTCCCGCATCTCCGCAACGCAAACCcaccttaaagggatactttgtgaTTTTGCAAtaagGTCTTCAACCCATGCTCTCTGGTCTCAGTAGAAGGTACACCAGTTGCTGTTATCACTGGGCATGAGGCCTCCggtgatgaggaggatgaggtCCACGAACCACCAGATGCCAAGGCCTCCTAGGGTCAGTAGCTTGCCCACGGCTGTGCCTGTATGCCCCAGGCAGAACCTGTCCACTCCAAAGCAACCCAGGAAGAACGAGTACAGCAGGGTGGTGATGAAATAGTGTCCAG
>TU1147995
ACCTTGAGAAACATTTTATTGAACCACAAATACTTGATAGCACACACACAGTTTGCATTCCTTCTTCTGTTTTTCTCAACCTGTCATTTTACAAGACACATACCATAAAATGAACCGGTAGACTTTTGACCATATTTACAGAAGACTGTCATTTCACATTTTTCCTATATTGAAAGGACATAGGGGAAATAAAGTTAAACATTTGAATGcataacaaaataataaaaaacaatcaCAGAATTGAGGGTACATACAGCATTACTCAATCTAATTGTTTTCATTTGGAACACTAAATCAGAAGTACATTTGGAGTAATCTCTATAACCCTGCAACCAGTACGGGTACAAAAGCTCAAAGTTGAGGCCAAAATAACAATATGTATACAGGTACTATGTACATATAATGTCAAATGTGAAATTTGGGCTTTAGTTAAGTGGGGTAAATTATTAGGAATCAAGAGTGAAATTCAATCCTATAACGCAACAATGGTTTGATGAGACTTGGAAAAGACCACAGTATGAAAACTTATGTGACAAACACTGAATAGCTCAAATGGTTGACTTATACGCCATTACAAAGCTTCAGTGATTGGATAGAACACAAATATTTAGactcctcatcagatggtcagacATGGTAATGCCTCAGATGTTGTGCAGTTGGTGCACGTATAAATCGCATGATGAAACTTATAGCCTAGATTTAAGCTTTCATATAGATATCATAGCAACAACCCATTTTCTTTGCTTCAACAGTTCAGTGCTCTAACCTTTACAACAAAATAAAACCTACACCAGCCACATGTCAACCACGCCCCTGGTCCACATCACACATCTTTCACAACTACTCCTGTAGTTATCCTACGATGAGAGACGAAAGACTGATGAAATACTAAAGCTGGATTTAAACTGCGGAAACAGCAGACAAGCGAATAATTGCTATCTATGGCGTGCACAAGCATAAAGTGATACCCCGTCAGGTGACATTATTCTCTAGGAGAATCTGAGATAAAGGCCTCTGACACGTGCTCAGACTGCTCTGACCTGTAATTCACATATAAGCGATGATACTTAGTTGTCCCGCATCTCCGCAACGCAAACCcaccttaaagggatactttgtgaTTTTGCAAtaaggccctttatctacttccgcAGAGTCAGATATACTTGtgtataccatttttatgtctgtgtccagtatggAGGAAGTCagagaaaaaaaaagagctCGCCAGAGTCCCTCAGTGACAAACATGTTTACTAATTAATTCAGCAGAAACCGACCGACTTACATTATGGTAAAGCAATGCCACCAAACGTAAGATGCTAGACTATTCCTGCATTATGGACATCTCTAAACACACAGGACAATAGGAAATAAACGTCTATAAAAAGGGATTTCATTTGGAAAGATATGTTTCATTCAGCCTTTGGGCTATTCAATTACATATGACCTACATATCATAAGACAAAAGTAATGTTTGATGTACAACGCCTTAAAAACTGTGTTCCGTGGTTTTTTCTTTCTTTTGCTGCATATTGCAATAATAACAGTACATGCCATTTTAATGACACATTCCATGTTTACTGGTCTAATCAGAGGAGGGTATGGTTGCAAAAGTCTAATTTACCAAAAGTTtgagttttccagaaatcctagttagaggattctggatttcctgctcatTCCGGGAATATGCCAACCGGGATTTCTGGGTATGACAATGTAGCCCAGTGGCCCAAGAGGACACTGTATATTCAGTATAGTGGGTGTATACGATCTTATTCCACCCCAGTAAACTACTCACTGCGGCCAAATAACAGTTGCAAAATAAAATGTTGTAATCAAAAGCCAAATAAATACACCTGCATGACACAGAGTATCAGAAATCTGAAGCTCAATTAGAATAGTTTGAGACAGTACCATGACTAGAAAGGACATTTCGTTAAGTTAGAGAGAACCCAAACCATCCATGATTTAAATGCTGTAAAGAGTGATCTTATCACTCAGTAAATATTGAATCCACCAAAAGGTCCATGACAGCAGATCCCATCACACTGCTTTATGTAATGACAATATCAATAAATAAGATGAGAAATCTTTTCCAACCCTTTTCTACCAAAATCCCCAAGCCAAACTTATTCATACAACCCAATCATAACCACCAACCTCATTGGAATGAGGAAACAAAATAGGGTGCCCAGCCCCTCTAAAGAATCTAGGTTAAAAACCTGTATATCAGTTTTTTTATAAAAGCTGTCAGTTATGTTTGTTGAGTAACCATCGACCCATGATAGAATCTGCACTTGTTTAAATTGATCACCTCAAATACAGCATCAAGAAATCACACCCCTGTACTGTCCATTGCGAGCATACATAACACCAAAAACAACAGACCCCTTTATGGGTTAAGATCACAGTTACGGTtagttaaaataaaaaaagtttacaATGATGATTCAAATCTGCCTCTTTTGTAACCAGTATTCAGCCAAATAACTGAAAATAACTGCCATCCCCAAACCATTGCACCATGGAGCCATCTACTTAGCATCAATTGAAAAAGCCTCTCAAAATAACAATCAATGCACTTTCACTGAAAGAAGCTGGAAACTAATAGGCTAATCACTGCTAATGCAAACCAAGTAAGCAACCACCTTTCACTAGTTACAACGCTCAATTGAAGTAGCAGCCCGCAATCAACAGCAATAGGAAGGAGGAACAAGATAAATTATTGATTTAACAGCAACTATTTTCCAAAGTGTTTAAGCTACTCAAAAATATGGCttgtatttgtttttaactgTTCCAAAAACAAAAGTTAAATTGAAAGTAGGAATCAGATGTCAAACTAGAGGTCACATGATTGATAATGACTAGCACATTTTAAACTAAACCAAAAACATCCACGGAAGAGACTACTTTTCATTTCAACCACAGCCATAACCGTAGTGTTACAATGAGCAATAAATCTGTACAAGTAAGGCAGCTTGTTTTAACTAGATTAGTCAAAGCTAGCACAAGTGCTGCCCCATGGTGCATTGGAGAGTCAAGCAGACTGTAAGCATGTAAATCATTGAGAATACTCTTTTACTCATCTGTTAAGACTACAGGTTTCATGGTCATACAGAAGCTCTCTGGGCTGACCTACATGTATTTAATGGAAAAAATGCACAGGATTGAACATgcctgggtcatattcattaggcaccaaacagaagaaaacagactgaaatatgGAGGGACTACCTTACCTTGTCCAATAAGAACGACTTGTTTTTTTCCGATGGCAAAGCACTATGTCATGgtatgcactaatgaatacaacccttcTGTGCATTCCAAAATGTTGCTGTACCCATATGACACTGCAGTTCACGGCTTCCAAACTGCTGGTCTTAGTGGCATATCGATCCATGTTGTATAGCAGCAATACAACTTATTCATCTTCATATTCTAACAACGCATTGACAACACTAATTTACCAAAACCGTTACGGGACCGGAAGGACCAATAACTTAAAATATGGTCATAAAACCCAAGTGAAATTCACTTCTCAGTTTGCTGTTGTTTTGCAAGCACTTCTTCCATCGCTTGCACTTAATCTCAGACCGCTGACTTCAAgatgatacaaaaaaaaaaagtctggtGTCCCTTCCCCCCAAAAGCAGCCTTGAGAAATCCATAGCCACgcatgtacagttacagtatagGAATGTAGGGGGTCTGACATGGCCAGACTAGCGTGTGTTCTGCAGTTCCAGTTTGTGTAGGCCTGTGagcaggaggaaaggaggggagctgtGTGTTTTGAAGTGGAGTAGGGAGAGTGAGGGCTCAGGGAGTTGTGATGGGGAGTGTCTGCGTGACGAGGGGTTatatgtgttggtggtggtgtctgTGGGAGGAGCCCCAACCAGTGCCAGAGGAAGGGGAACgctgggttgtgtcccaaatggcagtctTATAGTGTCCCATAGGGATcgggtaaaaagtagtgcaccatgtagggaatagggtgccatttggtacgtaGCCTCTGGGGTGTTGGGATGGGCAGCTGTCAGTGCACTCTTATGGGAATAATGCAGCCATCGGTTGCATCAGTGATGCTCTCTTCTTCTTACTCGctcagacagagggacagacagatggCTTCTGGGACTGGGGGCCTGGCAGGTCAGGGCTCAAATGGGCATCAGCCGAGTGGTGTTGAACAGGAGTGGGTTCAGTTCCTCTGCATGCACAGCCCTGTGGAGAGAGGGCTCTGAGGCACTCCGCTCGATTTTTGGTAACAGGTCCTGAACCTGCTCAATGCCTAACATGA
>TU1147994
AAATATAACTGTCTGGTTTCTCTGCCATGCGCCCCTGTAATTACCATGTGTCTGAAGCACAGTAAATGGTATCTTCAATGTGACATCATGCCTTTAGAACAGTCCATTTCAGGGGAGGTCAATTTCTTTATTTAGTTTGTACAAGATTCCAGTAAATGTGGCACTTTTGTCCTCCTTTCTGCAAACATAAAACAGAATAAACTAATGGGGAagtcagaaaaaaaaaaaaagaaaaaaaaagagctCGCCAGAGTCCCTCAGTGACAAACATGTTTACTAATTAATTCAGCAGAAACCGACCGACTTACATTATGGTAAAGCAATGCCACCAAACGTAAGATGCTAGACTATTCCTGCATTATGGACATCTCTAAACACACAGGACAATAGGAAATAAACGTCTATAAAAAGGGATTTCATTTGGAAAGATATGTTTCATTCAGCCTTTGGGCTATTCAATTACATATGACCTACATATCATAAGACAAAAGTAATGTTTGATGTACAACGCCTTAAAAACTGTGTTCCGTGGTTTTTTCTTTCTTTTGCTGCATATTGCAATAATAACAGTACATGCCATTTTAATGACACATTCCATGTTTACTGGTCTAATCAGAGGAGGGTATGGTTGCAAAAGTCTAATTTACCAAAAGTTtgagttttccagaaatcctagttagaggattctggatttcctgctcatTCCGGGAATATGCCAACCGGGATTTCTGGGTATGACAATGTAGCCCAGTGGCCCAAGAGGACACTGTATATTCAGTATAGTGGGTGTATACGATCTTATTCCACCCCAGTAAACTACTCACTGCGGCCAAATAACAGTTGCAAAATAAAATGTTGTAATCAAAAGCCAAATAAATACACCTGCATGACACAGAGTATCAGAAATCTGAAGCTCAATTAGAATAGTTTGAGACAGTACCATGACTAGAAAGGACATTTCGTTAAGTTAGAGAGAACCCAAACCATCCATGATTTAAATGCTGTAAAGAGTGATCTTATCACTCAGTAAATATTGAATCCACCAAAAGGTCCATGACAGCAGATCCCATCACACTGCTTTATGTAATGACAATATCAATAAATAAGATGAGAAATCTTTTCCAACCCTTTTCTACCAAAATCCCCAAGCCAAACTTATTCATACAACCCAATCATAACCACCAACCTCATTGGAATGAGGAAACAAAATAGGGTGCCCAGCCCCTCTAAAGAATCTAGGTTAAAAACCTGTATATCAGTTTTTTTATAAAAGCTGTCAGTTATGTTTGTTGAGTAACCATCGACCCATGATAGAATCTGCACTTGTTTAAATTGATCACCTCAAATACAGCATCAAGAAATCACACCCCTGTACTGTCCATTGCGAGCATACATAACACCAAAAACAACAGACCCCTTTATGGGTTAAGATCACAGTTACGGTtagttaaaataaaaaaagtttacaATGATGATTCAAATCTGCCTCTTTTGTAACCAGTATTCAGCCAAATAACTGAAAATAACTGCCATCCCCAAACCATTGCACCATGGAGCCATCTACTTAGCATCAATTGAAAAAGCCTCTCAAAATAACAATCAATGCACTTTCACTGAAAGAAGCTGGAAACTAATAGGCTAATCACTGCTAATGCAAACCAAGTAAGCAACCACCTTTCACTAGTTACAACGCTCAATTGAAGTAGCAGCCCGCAATCAACAGCAATAGGAAGGAGGAACAAGATAAATTATTGATTTAACAGCAACTATTTTCCAAAGTGTTTAAGCTACTCAAAAATATGGCttgtatttgtttttaactgTTCCAAAAACAAAAGTTAAATTGAAAGTAGGAATCAGATGTCAAACTAGAGGTCACATGATTGATAATGACTAGCACATTTTAAACTAAACCAAAAACATCCACGGAAGAGACTACTTTTCATTTCAACCACAGCCATAACCGTAGTGTTACAATGAGCAATAAATCTGTACAAGTAAGGCAGCTTGTTTTAACTAGATTAGTCAAAGCTAGCACAAGTGCTGCCCCATGGTGCATTGGAGAGTCAAGCAGACTGTAAGCATGTAAATCATTGAGAATACTCTTTTACTCATCTGTTAAGACTACAGGTTTCATGGTCATACAGAAGCTCTCTGGGCTGACCTACATGTATTTAATGGAAAAAATGCACAGGATTGAACATgcctgggtcatattcattaggcaccaaacagaagaaaacagactgaaatatgGAGGGACTACCTTACCTTGTCCAATAAGAACGACTTGTTTTTTTCCGATGGCAAAGCACTATGTCATGgtatgcactaatgaatacaacccttcTGTGCATTCCAAAATGTTGCTGTACCCATATGACACTGCAGTTCACGGCTTCCAAACTGCTGGTCTTAGTGGCATATCGATCCATGTTGTATAGCAGCAATACAACTTATTCATCTTCATATTCTAACAACGCATTGACAACACTAATTTACCAAAACCGTTACGGGACCGGAAGGACCAATAACTTAAAATATGGTCATAAAACCCAAGTGAAATTCACTTCTCAGTTTGCTGTTGTTTTGCAAGCACTTCTTCCATCGCTTGCACTTAATCTCAGACCGCTGACTTCAAgatgatacaaaaaaaaaaagtctggtGTCCCTTCCCCCCAAAAGCAGCCTTGAGAAATCCATAGCCACgcatgtacagttacagtatagGAATGTAGGGGGTCTGACATGGCCAGACTAGCGTGTGTTCTGCAGTTCCAGTTTGTGTAGGCCTGTGagcaggaggaaaggaggggagctgtGTGTTTTGAAGTGGAGTAGGGAGAGTGAGGGCTCAGGGAGTTGTGATGGGGAGTGTCTGCGTGACGAGGGGTTatatgtgttggtggtggtgtctgTGGGAGGAGCCCCAACCAGTGCCAGAGGAAGGGGAACgctgggttgtgtcccaaatggcagtctTATAGTGTCCCATAGGGATcgggtaaaaagtagtgcaccatgtagggaatagggtgccatttggtacgtaGCCTCTGGGGTGTTGGGATGGGCAGCTGTCAGTGCACTCTTATGGGAATAATGCAGCCATCGGTTGCATCAGTGATGCTCTCTTCTTCTTACTCGctcagacagagggacagacagatggCTTCTGGGACTGGGGGCCTGGCAGGTCAGGGCTCAAATGGGCATCAGCCGAGTGGTGTTGAACAGGAGTGGGTTCAGTTCCTCTGCATGCACAGCCCTGTGGAGAGAGGGCTCTGAGGCACTCCGCTCGATTTTTGGTAACAGGTCCTGAACCTGCTCAATGCCTAACATGA

Function

NR:

description
serine/threonine-protein kinase A-Raf-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1147992 False 1369 lncRNA 0.40 2 68002210 68003870
TU1147995 False 4330 lncRNA 0.40 2 68002210 68080438
TU1147994 True 3344 lncRNA 0.41 2 68019453 68080438

Neighbor

gene id symbol gene type direction distance location
LOC110535097 LOC106580544 coding upstream 529431 67453635 ~ 67472779 (+)
LOC110536274 LOC106580519 coding upstream 954683 67046528 ~ 67047527 (+)
LOC110536272 LOC106580517 coding upstream 1011811 66946456 ~ 66990399 (+)
LOC110536271 vp37b coding upstream 1058104 66915989 ~ 66944106 (+)
LOC110536270 LOC106580516 coding upstream 1086271 66896753 ~ 66915939 (+)
LOC118937378 NA coding downstream 18687 68099125 ~ 68101800 (+)
LOC110536289 LOC106580533 coding downstream 206620 68287058 ~ 68361204 (+)
LOC110535098 LOC106580534 coding downstream 284042 68364480 ~ 68413213 (+)
LOC110536291 LOC106580540 coding downstream 504189 68584627 ~ 68587134 (+)
LOC110536292 LOC106580550 coding downstream 510271 68590709 ~ 68611500 (+)
G1009170 NA non-coding upstream 26902 67974953 ~ 67975308 (+)
G1009168 NA non-coding upstream 30195 67971765 ~ 67972015 (+)
G1009167 NA non-coding upstream 33942 67968034 ~ 67968268 (+)
G1009165 NA non-coding upstream 37483 67964524 ~ 67964727 (+)
G1009090 NA non-coding upstream 86739 67863923 ~ 67915471 (+)
G1009233 NA non-coding downstream 8311 68088749 ~ 68091504 (+)
G1009244 NA non-coding downstream 34015 68114453 ~ 68114925 (+)
G1009280 NA non-coding downstream 107124 68187562 ~ 68187790 (+)
G1009936 NA non-coding downstream 281583 68362021 ~ 68362300 (+)
G1008017 NA other upstream 1119959 66881799 ~ 66882251 (+)
LOC110536267 LOC106580513 other upstream 1203993 66774135 ~ 66798230 (+)
G1007556 NA other upstream 1589275 66412574 ~ 66412935 (+)
G1007088 NA other upstream 1984637 66009581 ~ 66017573 (+)
G1007008 NA other upstream 2102842 65898748 ~ 65899368 (+)
LOC110535101 LOC106580561 other downstream 719762 68687221 ~ 68847333 (+)
LOC110536300 LOC106580593 other downstream 1318280 69398535 ~ 69400234 (+)
G1011336 NA other downstream 1553063 69633501 ~ 69633876 (+)
sb:cb288 NA other downstream 1624996 69705334 ~ 69711411 (+)

Expression


Co-expression Network