G1010001


Basic Information

Item Value
gene id G1010001
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 68462166 ~ 68462365 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1148892
ATCACCAGCAATAAGGGAACAGAACACATTATCCCTTCTCTAGACATCACCGGCAATAAGGGAACAGAACACATTATCCCTTCTCTAGACATCACCAGCAATAAGGGAACTGAACACATTATCCCTTCTCTAGACATCACCAGCAATAAGGGAACAGAACACATTATCCCTTCTCTAGACATCACCAGCAAGAAGGGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1148892 True 200 lncRNA 0.43 1 68462166 68462365

Neighbor

gene id symbol gene type direction distance location
LOC110535098 LOC106580534 coding upstream 48953 68364480 ~ 68413213 (+)
LOC110536289 LOC106580533 coding upstream 100962 68287058 ~ 68361204 (+)
LOC118937378 NA coding upstream 360366 68099125 ~ 68101800 (+)
LOC110536285 LOC106580528 coding upstream 389067 68064148 ~ 68073099 (+)
LOC110536283 LOC106580527 coding upstream 414202 68041053 ~ 68047964 (+)
LOC110536291 LOC106580540 coding downstream 122262 68584627 ~ 68587134 (+)
LOC110536292 LOC106580550 coding downstream 128344 68590709 ~ 68611500 (+)
LOC118937485 NA coding downstream 199385 68661750 ~ 68661802 (+)
LOC110535101 LOC106580561 coding downstream 224856 68687221 ~ 68847333 (+)
LOC118937380 NA coding downstream 458501 68918586 ~ 68924491 (+)
G1010000 NA non-coding upstream 91 68461867 ~ 68462075 (+)
G1009999 NA non-coding upstream 1463 68460495 ~ 68460703 (+)
G1009991 NA non-coding upstream 10623 68451231 ~ 68451543 (+)
G1009990 NA non-coding upstream 14892 68443649 ~ 68447274 (+)
G1009983 NA non-coding upstream 29247 68432602 ~ 68432919 (+)
G1010002 NA non-coding downstream 1162 68463527 ~ 68463794 (+)
G1010008 NA non-coding downstream 7647 68470012 ~ 68470224 (+)
G1010010 NA non-coding downstream 10822 68473187 ~ 68473416 (+)
G1010084 NA non-coding downstream 18162 68480527 ~ 68480835 (+)
G1010085 LOC106580537 non-coding downstream 20747 68483112 ~ 68483525 (+)
G1008017 NA other upstream 1579915 66881799 ~ 66882251 (+)
LOC110536267 LOC106580513 other upstream 1663949 66774135 ~ 66798230 (+)
G1007556 NA other upstream 2049231 66412574 ~ 66412935 (+)
G1007088 NA other upstream 2444593 66009581 ~ 66017573 (+)
G1007008 NA other upstream 2562798 65898748 ~ 65899368 (+)
LOC110536300 LOC106580593 other downstream 936353 69398535 ~ 69400234 (+)
G1011336 NA other downstream 1171136 69633501 ~ 69633876 (+)
sb:cb288 NA other downstream 1243069 69705334 ~ 69711411 (+)

Expression


Co-expression Network