Gene
RNA
| Item | Value |
|---|---|
| gene id | G1010146 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 68553099 ~ 68553333 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1149041 | True | 235 | lncRNA | 0.38 | 1 | 68553099 | 68553333 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535098 | LOC106580534 | coding | upstream | 139886 | 68364480 ~ 68413213 (+) |
| LOC110536289 | LOC106580533 | coding | upstream | 191895 | 68287058 ~ 68361204 (+) |
| LOC118937378 | NA | coding | upstream | 451299 | 68099125 ~ 68101800 (+) |
| LOC110536285 | LOC106580528 | coding | upstream | 480000 | 68064148 ~ 68073099 (+) |
| LOC110536283 | LOC106580527 | coding | upstream | 505135 | 68041053 ~ 68047964 (+) |
| LOC110536291 | LOC106580540 | coding | downstream | 31294 | 68584627 ~ 68587134 (+) |
| LOC110536292 | LOC106580550 | coding | downstream | 37376 | 68590709 ~ 68611500 (+) |
| LOC118937485 | NA | coding | downstream | 108417 | 68661750 ~ 68661802 (+) |
| LOC110535101 | LOC106580561 | coding | downstream | 133888 | 68687221 ~ 68847333 (+) |
| LOC118937380 | NA | coding | downstream | 367533 | 68918586 ~ 68924491 (+) |
| G1010133 | NA | non-coding | upstream | 16938 | 68535879 ~ 68536161 (+) |
| G1010129 | NA | non-coding | upstream | 21559 | 68531289 ~ 68531540 (+) |
| G1010125 | NA | non-coding | upstream | 25659 | 68527187 ~ 68527440 (+) |
| G1010119 | NA | non-coding | upstream | 30752 | 68522100 ~ 68522347 (+) |
| G1010085 | LOC106580537 | non-coding | upstream | 69574 | 68483112 ~ 68483525 (+) |
| G1010150 | NA | non-coding | downstream | 21930 | 68575263 ~ 68575762 (+) |
| G1010174 | NA | non-coding | downstream | 36464 | 68589797 ~ 68590115 (+) |
| G1010175 | NA | non-coding | downstream | 36837 | 68590170 ~ 68590567 (+) |
| G1010298 | NA | non-coding | downstream | 105205 | 68658538 ~ 68658757 (+) |
| G1008017 | NA | other | upstream | 1670848 | 66881799 ~ 66882251 (+) |
| LOC110536267 | LOC106580513 | other | upstream | 1754882 | 66774135 ~ 66798230 (+) |
| G1007556 | NA | other | upstream | 2140164 | 66412574 ~ 66412935 (+) |
| G1007088 | NA | other | upstream | 2535526 | 66009581 ~ 66017573 (+) |
| G1007008 | NA | other | upstream | 2653731 | 65898748 ~ 65899368 (+) |
| LOC110536300 | LOC106580593 | other | downstream | 845385 | 69398535 ~ 69400234 (+) |
| G1011336 | NA | other | downstream | 1080168 | 69633501 ~ 69633876 (+) |
| sb:cb288 | NA | other | downstream | 1152101 | 69705334 ~ 69711411 (+) |
