XLOC_028944



Basic Information


Item Value
gene id XLOC_028944
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 36585319 ~ 36585639 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00058265
agATGACAAGGATATGGGAGGGAAAAAATTCAAGACTGAAGGTAGGCACAGGGTTTGGGGTTTGGTGGGGGTTGCTTTTTTAGGTGGATTGTCACTAAATAGGTTTTATTCACTATTTTTGTATATAAATGTTATCTGTATTAGTGTGACTCAACAAAGTATGGGGTAATTTTGGGAGCTGTTCATGAACCTGGTCACTGGATTTTGGTGGTAAGTAAAAATTACTCACAATAGCTGTGAaacatgatgatgataatataatctaaaataatataaaaaatacatcataATACAACAATCTACAGGCCATCTTTCCGGACC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00058265 True 321 lncRNA 0.35 1 36585319 36585639

Neighbor


gene id symbol gene type direction distance location
XLOC_028943 NA coding downstream 1951 36581203 ~ 36583368 (-)
XLOC_028942 BX649453.1 coding downstream 62762 36506439 ~ 36522557 (-)
XLOC_028941 NA coding downstream 89025 36494958 ~ 36496294 (-)
XLOC_028940 si:dkey-238o14.1 coding downstream 100376 36473781 ~ 36484943 (-)
XLOC_028939 znf1109 coding downstream 440819 36132112 ~ 36144500 (-)
XLOC_028945 NA coding upstream 178501 36764140 ~ 37172305 (-)
XLOC_028946 si:dkeyp-87d1.1 coding upstream 203498 36789137 ~ 36791395 (-)
XLOC_028947 si:dkeyp-87d1.1 coding upstream 206093 36791732 ~ 36792144 (-)
XLOC_028948 si:dkeyp-87d1.1 coding upstream 206635 36792274 ~ 36793658 (-)
XLOC_028949 si:dkey-3p4.7 coding upstream 644948 37230587 ~ 37236494 (-)
XLOC_028935 NA non-coding downstream 774081 35809453 ~ 35811238 (-)
XLOC_028934 CABZ01087265.1 non-coding downstream 850150 35735006 ~ 35735169 (-)
XLOC_028933 NA non-coding downstream 892910 35691795 ~ 35692409 (-)
XLOC_028950 NA non-coding upstream 681571 37267210 ~ 37271230 (-)
XLOC_028951 NA non-coding upstream 686379 37272018 ~ 37273043 (-)
XLOC_028952 NA non-coding upstream 742888 37328527 ~ 37333793 (-)
XLOC_028953 NA non-coding upstream 793498 37379137 ~ 37380416 (-)

Expression



Co-expression Network